DNA-directed RNA polymerase

Protein Family Details

  Property   Value
 Name DNA-directed RNA polymerase
Family ID 88_m
First Chain 1h38 (A)
  No of Chains 14
  No of Clusters 5
  No of Rep. Chains 13
  No of Dimensions 4
No of Domain Movements 3

Clusters

Cluster ID Diameter (A) No of Chains Representative Members
1 0.0 1 1qln(A) 1qln(A) 
2 0.0 1 1cez(A) 1cez(A) 
3 0.0 1 1aro(P) 1aro(P) 
4 0.24 2 1s77(D) 1s76(D)  1s77(D) 
5 1.02 9 Extended 1h38(A)  1h38(B)  1h38(C)  1h38(D)  1msw(D)  1s0v(A)  1s0v(B)  1s0v(C)  1s0v(D) 

Dimensions

Dimension ID Chain 1 Chain 2 Dyndom Run
1 (Vector: v1) 1aro (P) 1h38 (A) true
2 (Vector: v2) 1aro (P) 1cez (A) true
3 (Vector: v3) 1h38 (A) 1s77 (D) true
4 (Vector: v4) 1h38 (A) 1s0v (B) false

Associated Chains for 1-dimension

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1s0v (C) DNA-directed RNA polymerase 857 3.2 5 0.99v1
1h38 (D) DNA-DIRECTED RNA POLYMERASE 857 2.9 5 0.99v1
1s0v (D) DNA-directed RNA polymerase 857 3.2 5 0.99v1
1h38 (A) DNA-DIRECTED RNA POLYMERASE 857 2.9 5 1.0v1
1aro (P) T7 RNA POLYMERASE 774 2.8 3 0

Associated Chains for 2-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1qln (A) BACTERIOPHAGE T7 RNA POLYMERASE 862 2.4 1 0.88v2
1cez (A) PROTEIN (BACTERIOPHAGE T7 RNA POLYMERASE) 862 2.4 2 1.0v2
1aro (P) T7 RNA POLYMERASE 774 2.8 3 0

Associated Chains for 3-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1s77 (D) DNA-directed RNA polymerase 828 2.69 4 1.0v1 + 1.0v3
1h38 (A) DNA-DIRECTED RNA POLYMERASE 857 2.9 5 1.0v1

Associated Chains for 4-dimensions

Chain ID Protein Name Sequence Length Resolution Cluster ID Projection
1h38 (C) DNA-DIRECTED RNA POLYMERASE 857 2.9 5 0.99v1 + (-0.03)v2 + 0.08v3 + 0.55v4
1msw (D) DNA-directed RNA polymerase 863 2.1 5 1.01v1 + (-0.05)v2 + 0.09v3 + 0.84v4
1h38 (B) DNA-DIRECTED RNA POLYMERASE 857 2.9 5 1.0v1 + 0.04v3 + 0.92v4
1s0v (A) DNA-directed RNA polymerase 857 3.2 5 1.0v1 + (-0.03)v2 + 0.03v3 + 0.52v4
1s0v (B) DNA-directed RNA polymerase 857 3.2 5 1.0v1 + 1.0v4
1h38 (A) DNA-DIRECTED RNA POLYMERASE 857 2.9 5 1.0v1