Tissue Factor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-105   LEU-106  6.1 6.0 -0.2 2.6 87.2 86.2 16.8
 LEU-106   GLY-107  2.5 2.4 2.0 -5.3 158.9 158.9 21.9
 GLY-107   GLN-108  3.6 3.5 2.7 -3.2 119.0 122.4 5.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-126   ASP-127  12.6 12.4 -0.6 -5.8 31.8 36.2 35.2
 ASP-127   ALA-128  12.2 11.7 -0.9 10.0 99.0 96.5 3.9
 ALA-128   ARG-129  9.6 9.2 -11.3 -26.3 42.3 40.3 197.9
 ARG-129   THR-130  10.9 11.0 38.3 -38.0 90.2 72.8 71.8
 THR-130   LEU-131  9.8 12.1 -46.8 13.4 82.9 73.5 35.2
 LEU-131   VAL-132  12.4 15.8 109.5 -21.8 166.5 123.6 -653.9
 THR-137   PHE-138  18.4 19.0 37.1 -34.4 79.8 53.1 57.0
 PHE-138   LEU-139  15.2 15.8 42.9 -45.7 106.5 128.8 6.7
 LEU-139   SER-140  12.6 12.2 -35.7 -2.5 131.4 120.5 -234.1
 SER-140   LEU-141  10.5 10.4 -19.3 -6.1 78.7 79.5 81.4
 LEU-141   ARG-142  6.8 6.7 2.3 -9.7 130.8 129.9 30.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-194   LYS-195  8.6 8.3 -13.8 12.5 109.9 111.9 23.8
 LYS-195   ARG-196  12.2 11.9 -3.4 -0.4 157.4 158.3 -33.9
 ARG-196   LYS-197  11.4 11.2 2.5 1.6 80.0 80.4 15.4
 LYS-197   GLN-198  8.4 8.1 2.4 0.8 74.1 74.5 5.6
 LYS-197   GLN-198  8.4 8.1 2.4 0.8 74.1 74.5 5.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-197   GLN-198  8.4 8.1 2.4 0.8 74.1 74.5 5.6
 LYS-197   GLN-198  8.4 8.1 2.4 0.8 74.1 74.5 5.6
 GLN-198   ARG-199  7.2 7.1 -6.8 -1.3 52.8 53.2 26.6
 ARG-199   SER-200  5.5 5.3 2.1 -4.3 119.0 121.3 22.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees