Archaeosine Trna-Guanine Transglycosylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-356   GLU-357  6.3 5.9 3.9 3.9 83.3 83.1 13.9  GLU-357   GLU-358  5.3 5.1 -7.6 3.2 34.1 36.0 47.4  GLU-358   PHE-359  5.9 5.6 -3.0 6.4 66.4 69.3 -8.8 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LYS-364   LYS-365  8.8 9.0 -3.9 9.9 62.5 66.3 30.7  LYS-365   SER-366  12.2 12.5 -1.6 -10.3 31.2 26.3 159.2  SER-366   ALA-367  11.1 11.8 1.5 8.2 135.9 134.7 -95.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-368   PHE-369  6.4 7.0 3.3 9.5 36.3 37.6 136.1  PHE-369   LYS-370  7.7 8.3 -8.8 4.4 107.6 113.4 -10.5  LYS-370   ILE-371  6.6 6.9 -8.2 -2.5 103.3 104.3 -116.0  ILE-371   SER-372  10.1 10.3 -1.0 3.9 95.8 96.4 -1.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  TRP-378   PRO-379  4.5 4.5 2.4 -7.3 112.9 110.3 23.9  PRO-379   VAL-380  3.6 3.3 7.8 -2.5 69.9 70.1 1.1  VAL-380   VAL-381  1.5 1.2 -1.7 4.1 156.2 155.3 38.2 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  VAL-399   GLU-400  11.0 11.2 -15.7 21.3 94.4 97.3 -30.1  GLU-400   HIS-401  7.3 7.5 -4.2 6.6 139.4 139.2 31.2  HIS-401   PRO-402  5.3 5.6 -1.4 4.0 84.8 86.6 69.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ILE-403   PHE-404  0.9 1.4 2.0 -3.1 95.6 95.1 13.2  PHE-404   GLY-405  3.8 3.6 7.1 -2.3 31.0 31.2 64.5  GLY-405   ARG-406  4.5 4.4 -0.7 2.5 105.6 102.7 21.4 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  GLN-419   SER-420  10.9 10.7 61.1 -90.2 114.8 99.4 200.5  SER-420   GLU-421  7.6 8.2 15.6 8.3 138.9 145.4 -249.1  GLU-421   ALA-422  8.5 9.0 7.4 0.1 104.3 109.3 -49.6  ALA-422   GLU-423  7.5 7.7 -11.2 5.0 40.2 39.9 38.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees