Aspartyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-277   SER-278  4.7 4.4 6.9 -11.5 103.4 103.8 37.6
 SER-278   TYR-279  7.2 6.9 1.7 6.3 66.3 72.3 -0.9
 TYR-279   GLU-280  10.7 10.5 -7.9 -5.9 49.6 55.2 147.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-290   PRO-291  10.9 11.2 4.3 -14.8 91.5 94.9 -82.2
 PRO-291   ASP-292  10.6 10.9 -2.3 4.6 33.9 41.6 36.8
 ASP-292   LEU-293  11.4 11.2 28.4 -23.1 64.7 58.3 -15.2
 LEU-293   ARG-294  10.2 10.3 -3.6 0.2 56.3 59.2 109.4
 ARG-294   PHE-295  12.1 12.2 -0.9 15.1 114.7 113.2 -19.7
 PHE-295   GLY-296  15.1 15.3 14.4 31.8 26.7 17.3 995.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-298   LEU-299  16.7 16.4 -6.6 0.4 53.9 55.0 187.5
 LEU-299   LYS-300  18.3 18.0 -22.3 25.6 19.5 15.2 -133.3
 LYS-300   GLU-301  18.7 18.8 -3.8 -1.7 57.4 57.1 25.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-404   LEU-405  20.8 20.7 -8.1 7.4 21.1 17.6 -32.2
 LEU-405   ARG-406  19.6 19.4 -11.0 4.2 46.3 51.9 177.5
 ARG-406   ALA-407  22.9 22.8 11.9 -11.1 81.7 80.8 -27.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-410   LEU-411  26.0 26.2 10.4 -15.2 102.3 100.4 109.5
 LEU-411   GLY-412  25.4 25.7 17.2 -44.6 44.6 46.7 -436.1
 GLY-412   LEU-413  23.9 23.8 46.3 -31.2 95.5 111.1 -1.5
 LEU-413   LYS-414  20.6 21.3 54.0 -16.8 36.2 48.0 600.6
 LYS-414   ARG-415  19.0 18.9 29.1 -45.0 108.7 107.2 43.0
 ARG-415   GLU-416  15.5 15.4 -18.0 -1.1 130.4 136.2 -347.5
 GLU-416   GLY-417  13.2 13.3 -6.2 9.2 64.2 65.8 51.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-421   TRP-422  2.6 2.5 10.5 -13.4 80.6 83.2 -76.8
 TRP-422   VAL-423  3.9 3.9 -0.1 -1.4 133.2 136.5 13.7
 VAL-423   VAL-424  6.9 6.9 17.4 -15.7 63.7 68.4 -13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-467   TYR-468  13.5 13.4 -16.1 20.5 97.8 98.3 9.4
 TYR-468   ASP-469  10.3 10.2 4.0 -15.2 20.4 25.5 -247.8
 ASP-469   LEU-470  9.4 9.2 -14.1 13.2 103.9 106.8 155.9
 LEU-470   VAL-471  6.3 6.2 9.7 -5.1 60.4 63.3 220.4
 VAL-471   LEU-472  6.4 6.3 2.6 -8.3 67.2 63.0 -87.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-476   VAL-477  10.3 10.1 4.0 5.8 35.1 36.0 222.6
 VAL-477   GLY-478  8.5 8.3 -3.2 -14.6 75.4 78.3 51.6
 GLY-478   GLY-479  9.4 9.6 23.1 -41.6 146.0 156.7 366.2
 GLY-479   GLY-480  12.2 11.7 -34.0 50.2 74.3 83.7 -21.3
 GLY-480   SER-481  14.0 13.9 38.8 -15.9 168.7 169.0 -520.4
 SER-481   ILE-482  15.5 15.3 1.5 4.4 98.7 98.1 -30.7
 ILE-482   ARG-483  17.3 17.4 -6.2 14.2 83.6 88.2 -119.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-521   HIS-522  23.4 23.5 9.9 -4.6 33.6 28.7 72.9
 HIS-522   GLY-523  21.3 21.4 -14.3 32.7 94.3 92.6 -9.0
 GLY-523   GLY-524  18.6 18.3 8.6 -17.0 48.7 31.4 -112.0
 GLY-524   ILE-525  16.0 16.0 -18.5 2.5 98.2 100.2 -36.1
 ILE-525   ALA-526  13.6 13.7 14.9 -19.8 11.9 12.8 -113.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees