3-Deoxy-Manno-Octulosonate Cytidylyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-71   HIS-72  14.9 15.6 165.7 20.1 132.8 129.5 -642.4
 HIS-72   ASN-73  16.3 13.4 165.9 -59.4 129.6 133.2 1461.3
 ASN-73   SER-74  13.2 15.3 -155.0 -95.8 9.9 21.8 -663.0
 SER-74   GLY-75  12.7 12.9 -10.4 4.2 67.8 86.0 21.5
 GLY-75   THR-76  10.6 10.1 4.0 -8.0 80.5 66.3 -39.8
 THR-76   GLU-77  7.9 7.8 -18.3 14.2 160.1 176.2 -10.6
 GLU-77   ARG-78  8.1 8.9 -4.4 6.5 94.8 106.7 -22.9
 ARG-78   LEU-79  8.0 8.7 -6.3 -5.7 66.2 82.0 -11.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-107   ILE-108  4.8 5.4 -7.2 18.4 117.7 119.0 40.8
 ILE-108   VAL-109  2.6 2.8 -0.2 11.7 167.1 165.7 74.2
 VAL-109   ARG-110  3.5 3.5 -14.8 11.8 93.7 93.5 10.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-188   TYR-189  6.3 6.7 -1.2 2.8 71.0 72.7 24.5
 TYR-189   ALA-190  4.3 4.8 7.5 -14.5 104.4 99.7 58.3
 ALA-190   TYR-191  2.3 2.5 -16.5 -13.3 44.8 50.4 166.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-192   ALA-193  5.9 4.9 12.8 -0.6 34.3 28.5 71.0
 ALA-193   GLY-194  3.9 3.2 6.6 2.1 41.7 50.5 48.7
 GLY-194   PHE-195  6.3 6.1 -9.0 1.8 83.9 76.8 29.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-230   LYS-231  5.0 4.6 1.1 12.5 27.5 26.9 66.7
 LYS-231   GLU-232  2.3 2.1 -16.8 22.3 114.2 114.3 -13.0
 GLU-232   VAL-233  5.3 5.5 4.6 -4.6 125.1 119.5 14.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees