Uridine Diphospho-N-Acetylenolpyruvylglucosamine Reductase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-49   SER-50  9.3 9.4 34.9 -27.9 29.2 23.4 6.5
 SER-50   ASN-51  8.6 8.6 3.8 4.4 83.2 81.1 38.9
 ASN-51   VAL-52  5.8 5.8 -2.2 -0.6 42.5 43.0 -32.8
 VAL-52   LEU-53  3.7 3.8 -3.0 -1.9 104.9 98.6 82.0
 LEU-53   PHE-54  2.7 3.0 -1.1 7.9 18.1 20.0 -92.1
 LEU-53   PHE-54  2.7 3.0 -1.1 7.9 18.1 20.0 -92.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-53   PHE-54  2.7 3.0 -1.1 7.9 18.1 20.0 -92.1
 LEU-53   PHE-54  2.7 3.0 -1.1 7.9 18.1 20.0 -92.1
 PHE-54   LEU-55  4.6 4.7 21.8 -11.4 91.4 86.7 -13.6
 LEU-55   GLU-56  6.2 6.1 18.0 -48.3 134.9 126.6 244.8
 GLU-56   ASP-57  7.8 8.1 -11.6 27.9 103.8 122.1 165.3
 GLU-56   ASP-57  7.8 8.1 -11.6 27.9 103.8 122.1 165.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-56   ASP-57  7.8 8.1 -11.6 27.9 103.8 122.1 165.3
 GLU-56   ASP-57  7.8 8.1 -11.6 27.9 103.8 122.1 165.3
 ASP-57   TYR-58  8.7 8.7 0.0 -9.5 52.7 62.2 29.6
 TYR-58   ARG-59  6.1 5.9 10.5 -7.5 13.3 17.4 56.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-214   THR-215  11.1 10.8 4.2 -3.5 88.7 87.3 -52.5
 THR-215   THR-216  12.7 11.9 -4.1 14.1 129.0 127.2 101.8
 THR-216   LYS-217  10.6 9.4 13.1 -18.4 101.9 113.9 17.6
 LYS-217   LEU-218  7.0 6.3 -4.3 -4.3 22.2 22.2 94.7
 LEU-218   PRO-219  7.2 7.2 -11.5 -4.7 73.3 76.2 -10.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-275   GLY-276  7.9 7.4 1.9 2.8 86.2 85.7 -18.9
 GLY-276   MET-277  10.1 9.9 3.9 -5.6 45.1 49.6 -46.7
 MET-277   GLN-278  12.0 11.6 29.4 -38.9 31.6 30.9 -116.8
 GLN-278   ILE-279  13.3 12.8 25.5 -11.9 50.4 46.1 145.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-282   ALA-283  10.7 10.8 5.8 -6.6 153.8 152.6 59.2
 ALA-283   VAL-284  9.6 9.6 13.1 -10.9 110.7 107.1 -79.8
 VAL-284   HIS-285  7.0 6.7 2.6 -2.0 133.9 133.7 -20.3
 HIS-285   ARG-286  5.6 5.6 0.2 -16.0 155.5 159.3 157.6
 ARG-286   GLN-287  6.2 5.9 31.4 -17.6 120.7 121.8 -6.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-323   PRO-324  10.1 9.9 -9.9 14.7 90.5 88.3 56.5
 PRO-324   GLU-325  6.4 6.2 4.6 -14.5 75.4 77.0 -15.8
 GLU-325   VAL-326  6.2 5.9 16.5 -17.1 44.5 51.0 18.4
 VAL-326   ARG-327  3.2 2.9 -6.9 14.3 157.3 160.6 76.4
 ARG-327   PHE-328  3.4 3.3 -2.8 -7.4 117.7 112.1 -77.1
 PHE-328   ILE-329  2.0 1.8 -4.7 8.8 165.0 167.5 36.7
 ILE-329   GLY-330  0.7 0.6 -3.7 1.0 115.8 119.3 10.3
 GLY-330   ALA-331  3.6 3.3 3.8 -0.1 40.1 38.7 0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-333   GLU-334  1.6 1.8 -1.2 13.3 150.3 146.5 157.9
 GLU-334   VAL-335  3.6 3.5 -3.5 7.1 91.2 83.2 15.7
 VAL-335   SER-336  6.0 5.7 18.4 -17.2 28.9 30.2 -25.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees