Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-77   TYR-78  5.5 6.9 -48.8 78.5 45.8 50.7 -5.6
 TYR-78   SER-79  4.3 5.8 170.9 43.3 126.9 110.2 91.2
 SER-79   GLU-80  2.1 5.0 -147.4 6.6 35.3 130.6 18.4
 GLU-80   SER-81  3.0 4.6 -2.2 -27.2 52.0 99.6 21.2
 SER-81   HIS-82  1.5 1.0 49.6 -75.3 77.3 146.6 18.9
 HIS-82   ALA-83  2.4 0.3 146.0 -0.5 109.6 113.0 -28.5
 ALA-83   LEU-84  3.7 4.1 24.1 0.5 170.2 168.8 -15.2
 LEU-84   ILE-85  3.0 3.5 9.5 -4.4 109.1 108.2 -1.5

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees