Atp-Dependent Molecular Chaperone Hsp82

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-91   ASN-92  2.6 3.4 -4.0 11.5 170.4 164.5 14.4
 ASN-92   LEU-93  2.7 3.8 28.7 -34.4 53.2 48.6 -13.3
 LEU-93   GLY-94  0.8 0.5 5.4 -75.4 103.5 86.0 -13.3
 GLY-94   THR-95  3.4 3.2 -4.0 -27.0 119.4 72.9 -28.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-113   VAL-114  3.4 3.5 -138.3 75.4 145.5 161.1 -98.6
 VAL-114   SER-115  1.5 1.2 123.7 -163.7 78.3 69.7 11.9
 SER-115   MET-116  3.3 4.1 -130.7 15.0 170.0 114.3 -130.4
 MET-116   ILE-117  4.4 6.2 45.3 62.0 79.8 8.5 146.9
 ILE-117   GLY-118  7.7 4.5 144.5 -140.3 147.3 48.5 -3.9
 GLY-118   GLN-119  9.8 7.3 159.0 -14.5 100.6 86.8 -36.4
 GLN-119   PHE-120  9.8 9.9 -159.8 -161.3 77.7 125.0 38.1
 PHE-120   GLY-121  6.9 8.7 -22.8 165.6 120.7 157.1 172.3
 GLY-121   VAL-122  5.2 7.9 -137.1 -2.4 135.6 110.4 -129.9
 VAL-122   GLY-123  3.3 4.1 11.2 -115.4 33.2 119.4 -28.2
 GLY-123   PHE-124  3.3 4.3 112.5 2.7 76.2 62.2 58.9
 PHE-124   TYR-125  1.9 4.1 -9.6 -19.1 64.4 71.1 12.3
 TYR-125   SER-126  2.2 2.4 25.6 -1.7 141.6 154.0 -25.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees