Mitochondrial Rna-Binding Protein 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-36   VAL-37  4.7 5.1 11.1 -5.2 131.1 123.9 -21.9
 VAL-37   ARG-38  3.2 2.9 35.9 -20.4 141.7 141.6 -84.5
 ARG-38   ASP-39  2.5 2.1 -20.7 -15.1 45.5 46.5 141.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-43   GLY-44  5.9 6.0 -8.7 -14.7 86.1 65.2 30.9
 GLY-44   THR-45  2.7 2.5 21.2 -28.2 145.7 166.6 68.1
 THR-47   ARG-48  4.1 4.3 -13.2 20.9 64.4 58.1 -26.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-60   TYR-61  0.7 1.0 16.4 -10.9 110.1 111.7 9.3
 TYR-61   PRO-62  2.6 2.2 24.0 -28.7 160.4 155.0 20.7
 PRO-62   GLN-63  3.9 3.7 6.7 -12.5 139.2 132.6 54.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-76   GLN-77  11.5 10.6 32.8 6.6 56.1 57.5 141.5
 GLN-77   PHE-78  8.2 7.3 -9.0 2.9 59.8 59.3 23.1
 PHE-78   ASP-79  6.3 5.5 32.2 -29.8 130.3 126.0 -0.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees