Tyrosyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-108   GLN-109  5.6 5.9 8.9 -15.1 88.9 85.7 -62.3
 GLN-109   LEU-110  9.2 9.2 7.5 10.7 30.3 30.6 137.4
 LEU-110   ASP-111  9.9 9.9 -8.8 9.9 123.4 122.9 30.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-155   VAL-156  13.1 13.6 30.9 -39.7 76.3 70.1 -85.6
 VAL-156   ASN-157  13.2 13.8 38.5 9.0 133.7 134.7 -379.4
 ASN-157   ASP-158  11.6 11.9 164.2 9.9 83.5 71.0 -25.1
 ASP-158   ILE-159  8.8 10.2 20.4 0.7 48.3 98.0 103.4
 ILE-159   HIS-160  8.2 6.8 12.6 -6.7 113.1 38.7 144.4
 HIS-160   TYR-161  9.0 6.5 24.9 -47.0 126.6 39.9 71.6
 TYR-161   LEU-162  6.4 6.6 41.2 16.5 65.7 101.0 -280.3
 LEU-162   GLY-163  3.4 6.0 133.1 14.6 54.4 57.0 1244.2
 GLY-163   VAL-164  5.7 5.7 -27.0 -28.3 162.3 145.7 -630.1
 VAL-164   ASP-165  4.4 4.1 -22.9 8.1 133.8 138.3 34.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-168   GLY-169  8.2 8.1 -8.8 6.4 113.5 114.1 40.1
 GLY-169   GLY-170  12.0 11.8 -20.1 28.1 42.4 41.2 -49.6
 GLY-170   MET-171  15.3 14.9 -9.0 8.3 80.3 86.8 -12.3
 MET-171   GLU-172  17.5 17.0 -112.8 110.4 140.5 137.0 -37.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-188   VAL-189  10.1 9.9 -4.4 24.9 153.2 153.2 175.3
 VAL-189   CYS-190  9.1 9.0 4.4 -8.3 98.0 96.4 18.9
 CYS-190   ILE-191  10.0 9.8 -16.0 17.7 147.8 152.9 5.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees