Rrf2 Family Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-80   TYR-81  8.0 7.7 -0.3 -1.3 96.3 92.3 -6.1
 TYR-81   HIS-82  5.7 5.1 -1.3 7.5 52.2 48.4 4.9
 HIS-82   ALA-83  2.6 2.3 -4.5 2.4 18.6 25.8 0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-119   ALA-120  8.4 7.5 5.6 -10.1 105.1 95.1 -4.6
 ALA-120   GLN-121  5.9 5.1 5.8 2.8 42.9 28.7 26.0
 GLN-121   SER-122  4.5 4.4 -6.2 -1.7 92.9 91.4 2.2
 SER-122   ALA-123  4.8 4.1 6.4 -1.1 131.4 129.8 -28.4
 GLU-125   GLU-126  2.1 2.1 -7.3 -2.8 72.4 68.2 13.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees