Homoserine Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-11   PRO-12  9.9 10.0 -8.9 9.9 89.3 91.0 -42.9
 PRO-12   CYS-13  6.3 6.3 -4.0 6.2 86.5 86.8 -27.4
 CYS-13   THR-14  4.5 4.7 1.9 0.6 164.5 164.5 -4.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-31   PRO-32  3.3 3.2 -7.3 -13.2 83.7 84.6 188.9
 PRO-32   TYR-33  2.0 1.9 5.6 -2.5 71.4 73.0 15.7
 TYR-33   ASP-34  5.5 5.5 5.5 -2.7 142.0 144.2 -36.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-85   LYS-86  13.3 13.3 1.5 6.9 63.8 61.0 111.8
 LYS-86   LYS-87  9.8 9.9 14.2 -17.0 130.1 131.8 57.1
 LYS-87   GLY-88  7.4 7.6 1.1 -4.0 104.2 105.1 -32.7
 GLY-88   VAL-89  4.4 4.5 7.0 -8.6 77.0 81.9 -8.9
 VAL-89   LYS-90  4.1 4.4 -10.6 9.3 108.6 101.8 16.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-95   GLY-96  6.8 7.1 2.3 -3.8 100.0 99.8 -10.2
 GLY-96   SER-97  8.9 9.1 15.1 -14.9 41.9 42.3 6.2
 SER-97   SER-98  8.7 9.1 3.7 -8.5 92.0 89.2 25.9
 SER-98   ALA-99  12.4 12.7 3.6 8.3 138.7 142.7 -115.2
 ALA-99   ALA-100  12.3 12.3 -13.1 4.5 98.6 98.7 31.2
 ALA-100   SER-101  10.1 10.3 1.5 -1.7 63.4 63.0 -23.4
 SER-101   SER-102  13.1 13.2 2.4 -3.9 125.8 125.1 43.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-118   LYS-119  20.4 20.2 26.6 -12.2 58.6 59.5 34.1
 LYS-119   LEU-120  16.8 16.7 -1.0 8.2 89.0 86.2 -23.0
 LEU-120   LYS-121  17.2 17.4 0.5 -5.3 54.8 51.4 -31.5
 LYS-121   LEU-122  20.6 20.6 7.6 -7.6 17.9 16.3 19.9
 LEU-122   VAL-123  18.9 18.8 -3.4 3.5 99.5 100.1 -40.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-140   ASN-141  12.0 12.1 -1.0 5.8 130.7 134.3 26.0
 ASN-141   VAL-142  10.3 10.5 -4.3 4.3 93.4 91.8 117.6
 VAL-142   ALA-143  12.1 12.3 -1.0 7.9 37.2 36.9 -119.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-144   ALA-145  7.7 7.7 6.8 -9.7 136.2 139.1 -22.7
 ALA-145   ILE-146  8.8 8.8 11.8 -7.1 69.0 73.1 -2.1
 ILE-146   PHE-147  11.6 11.7 -0.1 -3.7 137.4 136.2 -55.7
 PHE-147   GLY-148  10.1 10.2 2.2 0.8 96.3 97.3 -23.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees