Leucyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-818   VAL-819  11.2 11.5 -24.0 22.5 98.4 97.8 20.3
 VAL-819   ALA-820  14.2 14.3 -9.3 9.7 128.9 127.3 -9.8
 ALA-820   VAL-821  16.9 16.9 -0.2 -11.2 64.5 62.3 156.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-831   HIS-832  16.7 16.6 7.0 -5.2 76.3 76.0 20.6
 HIS-832   ILE-833  13.5 13.5 -35.7 38.1 170.6 166.2 58.5
 ILE-833   PRO-834  12.9 13.2 2.3 -4.5 78.4 81.5 -0.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-837   PRO-838  13.8 13.8 -1.3 -2.0 85.4 84.1 55.7
 PRO-838   LEU-839  17.1 17.0 11.1 -1.0 54.7 56.0 154.0
 LEU-839   GLU-840  20.3 20.4 -8.1 3.7 79.2 82.9 -30.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-864   ILE-865  27.2 27.0 1.9 -9.6 84.5 94.1 -24.9
 ILE-865   TYR-866  24.6 24.3 -15.0 2.9 90.2 92.1 74.4
 TYR-866   VAL-867  20.9 20.7 -16.1 18.8 85.2 86.5 23.4
 VAL-867   PRO-868  18.2 18.1 -19.6 9.5 100.6 104.5 -22.7
 PRO-868   GLY-869  14.9 15.1 -1.5 -9.6 40.7 49.6 243.5
 GLY-869   LYS-870  13.1 12.8 34.3 -16.2 116.1 125.3 -343.8
 LYS-870   ILE-871  13.9 14.0 -29.3 27.8 71.3 70.6 -44.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees