DNA Helicase Uvsw

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-29   SER-30  5.9 5.7 -6.5 -6.3 42.6 46.8 68.8
 SER-30   PHE-31  6.3 6.0 4.1 -1.9 146.6 150.6 -3.1
 PHE-31   GLU-32  5.5 5.6 2.4 -0.8 136.1 132.9 -18.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-51   ARG-52  6.2 6.1 -9.1 10.6 29.8 29.8 -34.1
 ARG-52   LEU-53  6.2 6.4 -15.2 6.0 56.7 56.7 69.3
 LEU-53   LEU-54  3.4 3.3 -4.3 -6.3 13.4 15.7 73.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-263   ASP-264  9.4 9.3 -17.2 40.3 115.9 112.7 72.7
 ASP-264   GLY-265  10.1 11.0 -35.9 -8.0 46.4 70.8 106.0
 GLY-265   LYS-266  9.1 9.8 -6.5 51.4 92.9 82.5 -10.5
 LYS-266   ALA-267  5.6 6.0 -5.4 16.1 161.4 140.9 56.1
 ALA-267   ASN-268  4.8 4.5 -21.5 -10.5 130.3 141.9 -172.1
 ASN-268   ILE-269  2.6 2.2 -6.6 18.3 121.2 121.9 18.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees