50S Ribosomal Protein L22

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-76   ASP-77  4.5 4.2 -4.1 0.8 125.2 125.1 -5.3
 ASP-77   GLU-78  5.4 5.1 8.8 -1.2 50.4 50.5 10.4
 GLU-78   GLY-79  3.7 3.7 -3.6 -0.5 158.3 153.3 -13.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-96   LYS-97  13.4 10.6 -34.8 17.7 91.0 130.6 -27.5
 LYS-97   LYS-98  9.7 10.9 163.4 -39.2 18.5 29.6 298.4
 LYS-98   ARG-99  7.8 8.0 25.8 -30.4 83.7 105.6 -15.7
 ARG-99   THR-100  4.6 4.4 -1.0 26.9 103.5 108.9 19.6
 THR-100   SER-101  2.2 2.2 16.5 -10.8 48.4 48.4 21.7
 SER-101   HIS-102  2.2 1.9 1.8 2.6 99.0 94.2 13.4
 SER-101   HIS-102  2.2 1.9 1.8 2.6 99.0 94.2 13.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-101   HIS-102  2.2 1.9 1.8 2.6 99.0 94.2 13.4
 SER-101   HIS-102  2.2 1.9 1.8 2.6 99.0 94.2 13.4
 HIS-102   ILE-103  5.6 5.3 6.7 -5.6 12.3 12.6 0.0
 ILE-103   THR-104  7.2 7.0 -0.5 3.3 100.7 98.9 5.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees