Reverse Transcriptase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-63
TYR-64
2.2
2.2
0.9
11.0
97.1
93.8
-12.7
TYR-64
PRO-65
5.8
5.8
-5.4
5.6
37.6
53.1
3.8
PRO-65
MET-66
7.7
8.1
-11.7
-3.1
28.8
15.4
68.9
MET-66
SER-67
7.1
7.5
-15.6
-4.9
55.7
56.2
53.0
SER-67
GLN-68
9.9
10.2
-39.4
22.6
49.1
44.5
59.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-73
ILE-74
3.7
4.6
16.1
-36.7
107.2
98.2
80.4
ILE-74
LYS-75
1.0
1.3
29.0
-17.5
84.1
93.7
-4.0
LYS-75
PRO-76
4.6
4.4
10.6
-1.2
47.8
46.9
30.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-99
PRO-100
5.4
5.2
-31.9
19.8
13.0
10.7
80.4
PRO-100
VAL-101
5.6
5.0
-12.7
30.3
66.6
65.9
-81.5
VAL-101
LYS-102
8.2
7.8
-7.1
-12.1
8.3
20.2
114.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-108
TYR-109
6.6
6.4
-36.1
0.9
27.2
23.0
182.0
TYR-109
ARG-110
5.1
4.9
6.4
-12.0
91.6
94.9
12.0
ARG-110
PRO-111
4.3
4.2
2.1
-25.4
168.8
171.9
124.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-170
GLU-171
5.4
5.5
-20.8
18.7
81.8
81.5
23.5
GLU-171
TRP-172
4.5
4.9
-13.4
-22.8
19.5
25.4
184.1
TRP-172
ARG-173
5.7
6.5
0.3
-6.9
88.1
92.1
28.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-175
GLU-176
13.5
15.5
-13.6
92.8
105.3
147.4
274.0
GLU-176
MET-177
15.6
15.5
-123.0
-175.2
105.3
96.6
35.8
MET-177
GLY-178
16.2
14.4
-82.9
-132.2
100.6
40.8
570.6
GLY-178
ILE-179
13.3
16.6
139.1
-11.3
143.2
135.3
-688.8
ILE-179
SER-180
12.2
13.4
-35.7
-32.8
36.1
55.2
306.6
SER-180
GLY-181
12.8
13.1
78.8
-37.8
134.7
144.2
-169.3
GLY-181
GLN-182
9.9
10.4
13.7
-54.2
71.8
71.3
-90.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees