425Aa Long Hypothetical Proton Glutamate Symport Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-340   ILE-341  8.1 7.5 -5.9 9.6 68.9 70.7 6.6
 ILE-341   VAL-342  5.4 5.1 -14.9 17.9 141.7 147.7 15.1
 VAL-342   LEU-343  4.7 4.8 -2.8 -2.3 112.8 110.5 -1.2
 LEU-343   THR-344  4.5 3.7 -1.9 7.0 61.4 53.4 -20.3
 THR-344   ALA-345  3.7 2.7 -21.2 8.3 82.7 83.3 12.6
 ALA-345   VAL-346  0.3 1.1 2.0 19.1 41.8 43.0 31.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-364   MET-365  3.7 2.8 -2.1 25.2 63.4 55.3 -55.9
 MET-365   VAL-366  4.5 3.8 -17.6 -2.1 60.3 66.9 36.7
 VAL-366   LEU-367  1.7 1.5 10.2 3.7 44.7 44.5 33.4
 LEU-367   HIS-368  2.3 2.6 -11.5 5.0 105.4 100.5 4.7
 HIS-368   SER-369  5.3 5.4 2.7 2.2 133.6 140.5 3.6
 SER-369   VAL-370  6.5 6.3 1.4 -12.9 80.2 80.9 -7.9
 VAL-370   GLY-371  7.6 7.4 25.8 -28.5 38.0 33.0 -15.4
 GLY-371   LEU-372  8.5 8.5 11.6 -18.2 33.9 29.9 -23.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees