Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-107   SER-108  8.2 8.5 -0.1 8.4 54.3 58.5 -12.9
 SER-108   LEU-109  5.0 5.1 18.2 -7.8 50.8 49.9 40.3
 LEU-109   GLY-110  1.6 1.7 -5.5 -22.1 59.8 55.7 79.5
 GLY-110   ILE-111  2.3 2.1 -1.1 8.4 133.0 130.1 11.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-215   ASP-216  8.0 7.6 5.6 -0.7 31.4 37.3 24.2
 ASP-216   SER-217  5.1 4.6 -2.1 4.2 78.4 77.7 7.3
 SER-217   LYS-218  1.3 0.8 -8.7 25.3 107.7 98.1 40.1
 LYS-218   GLY-219  3.1 3.1 -3.8 -18.6 60.2 68.6 41.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees