Succinyl-Coa Synthetase, Beta Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-322   VAL-323  4.8 5.0 -7.7 13.2 83.5 78.0 -17.4
 VAL-323   ASN-324  3.4 3.7 -3.0 -0.4 4.1 2.6 -2.1
 ASN-324   ILE-325  4.6 5.0 -4.4 1.5 79.6 72.5 12.5
 ILE-325   PHE-326  6.8 6.8 -3.4 36.5 21.5 11.0 -151.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-343   ARG-344  4.9 5.7 32.1 -1.5 144.2 127.4 -164.0
 ARG-344   GLU-345  7.7 8.9 -14.7 -11.3 33.2 23.5 169.4
 GLU-345   LEU-346  8.0 8.4 56.2 -45.3 114.2 99.9 -40.0
 LEU-346   GLU-347  4.8 4.6 -16.4 10.9 78.0 89.0 97.6
 GLU-347   LEU-348  3.8 4.6 33.5 11.7 69.5 57.8 232.8
 LEU-348   LYS-349  1.6 3.1 -6.5 -16.9 101.5 78.3 22.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-352   VAL-353  3.3 3.4 -26.6 13.3 20.4 12.5 88.5
 VAL-353   VAL-354  3.8 3.8 3.8 -5.3 111.3 112.8 -37.4
 VAL-354   ARG-355  1.0 0.7 -2.4 -8.7 4.2 1.6 111.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-374   ILE-375  8.4 8.1 13.8 5.6 44.6 47.0 122.9
 ILE-375   THR-376  6.5 6.3 13.0 -5.6 26.3 46.0 8.3
 THR-376   SER-377  6.9 6.9 -24.6 25.2 130.5 138.0 20.3
 SER-377   ALA-378  5.4 5.3 24.0 -22.9 41.6 51.0 8.6
 ALA-378   VAL-379  4.4 4.4 10.0 -29.2 23.6 25.3 -131.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees