Glycerol-3-Phosphate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ALA-208   VAL-209  10.2 10.1 -0.1 12.1 99.4 100.8 -26.0  VAL-209   LYS-210  6.5 6.2 -2.6 9.2 151.3 148.6 67.0  LYS-210   ASN-211  6.6 6.6 2.6 -8.4 90.3 92.7 -14.2 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ARG-230   ALA-231  5.5 5.1 0.2 2.8 90.8 92.6 30.0  ALA-231   ALA-232  3.5 3.3 3.1 -7.6 40.4 41.3 -61.2  ALA-232   LEU-233  5.9 5.7 6.9 -1.0 31.0 30.9 59.8 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  MET-235   ARG-236  4.5 4.8 5.7 -9.2 162.5 159.9 10.9  ARG-236   GLY-237  5.3 5.6 3.5 2.3 128.9 132.0 -22.5  GLY-237   LEU-238  2.0 2.2 -6.4 8.7 83.2 82.3 -30.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ILE-241   ARG-242  6.4 6.4 1.2 0.1 79.0 78.5 14.1  ARG-242   ASP-243  9.4 9.4 3.4 -2.1 18.7 18.3 -33.2  ASP-243   LEU-244  9.1 9.1 4.2 -1.9 46.3 45.1 44.3 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  THR-267   CYS-268  9.0 8.7 -4.9 8.2 87.7 87.9 -22.3  CYS-268   SER-269  6.4 6.1 -14.5 20.3 149.7 145.7 -43.3  SER-269   SER-270  7.1 7.2 1.0 64.2 65.5 81.3 191.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  PRO-307   LEU-308  8.2 8.3 -3.6 2.5 62.6 65.8 -3.1  LEU-308   MET-309  5.8 5.6 -1.7 0.0 115.9 120.5 14.4  MET-309   ARG-310  3.2 3.2 0.6 -1.2 27.1 23.5 20.3 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  VAL-317   LYS-318  6.3 6.1 -1.0 -1.6 105.4 112.4 -5.6  LYS-318   MET-319  5.7 5.7 8.2 -3.8 31.5 27.2 25.2  MET-319   PRO-320  3.1 3.4 5.8 8.5 79.0 73.6 43.6 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ASP-349   GLU-350  17.8 17.5 -3.5 9.2 84.3 87.2 -85.7  GLU-350   GLY-351  14.7 14.4 13.0 14.0 42.0 44.2 167.8  GLY-351   LEU-352  15.9 14.4 -3.8 -35.6 93.3 73.9 15.5  LEU-352   PRO-353  14.7 15.0 -13.8 -0.9 92.5 88.0 -20.0  PRO-353   PRO-354  17.7 18.4 8.3 -8.3 149.9 153.1 -42.5 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees