Atp Synthase Gamma Chain, Mitochondrial Precursor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-24   MET-25  1.3 1.4 13.4 -7.3 114.8 116.9 36.5
 MET-25   VAL-26  3.3 3.4 0.3 -9.2 113.5 115.2 21.3
 VAL-26   ALA-27  3.1 3.0 5.5 3.8 41.0 43.2 98.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-130   VAL-131  18.8 18.8 -11.0 6.7 62.3 59.0 -26.1
 VAL-131   GLY-132  17.4 17.5 -20.9 17.4 76.5 78.3 30.1
 GLY-132   ARG-133  14.0 14.1 6.0 -1.6 34.9 41.7 17.7
 ARG-133   ARG-134  12.8 12.4 -3.5 17.9 113.6 109.5 -1.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-166   SER-167  11.7 11.8 19.7 -23.4 54.2 63.8 -49.3
 SER-167   VAL-168  9.9 10.1 0.4 6.7 52.6 56.2 117.5
 VAL-168   ILE-169  7.3 7.4 -2.8 1.5 59.0 63.5 95.5
 ILE-169   SER-170  4.8 4.8 -30.9 38.4 48.0 60.3 -162.0
 SER-170   TYR-171  6.4 6.6 -7.1 8.8 108.0 112.6 -1.7
 TYR-171   LYS-172  8.9 8.9 -0.3 -5.5 40.0 39.7 24.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-223   GLU-224  10.1 10.0 -0.1 -1.0 114.9 116.2 47.8
 GLU-224   GLN-225  9.1 9.1 7.5 3.9 55.3 53.7 88.6
 GLN-225   SER-226  7.2 7.2 -17.3 -1.4 63.0 63.6 90.2
 SER-226   ALA-227  6.1 5.7 18.9 -13.7 108.9 118.2 -141.8
 ALA-227   ARG-228  4.3 4.4 19.7 -13.9 48.0 49.3 -22.2
 ARG-228   MET-229  3.9 3.8 6.3 -0.9 71.2 76.4 7.8
 MET-229   THR-230  1.7 1.5 -0.8 -0.1 48.0 48.3 -20.5
 THR-230   ALA-231  1.0 0.8 6.0 -7.1 90.3 84.6 42.5
 ALA-231   MET-232  3.0 3.4 -4.9 -1.9 141.1 141.1 -30.3
 MET-232   ASP-233  3.6 3.8 0.2 -3.6 89.9 89.3 38.7
 ASP-233   ASN-234  4.6 4.8 -3.8 3.4 57.8 55.9 53.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees