Maltose Transport Protein Malk

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-82   ILE-83  8.4 8.1 4.3 -5.9 169.2 167.9 5.9
 ILE-83   ALA-84  8.3 8.2 -2.4 3.8 68.2 65.7 0.8
 ALA-84   MET-85  6.2 6.3 -0.9 -1.7 28.3 27.5 -6.2
 MET-85   VAL-86  8.4 8.6 -22.4 29.1 55.4 60.3 -6.7
 VAL-86   PHE-87  6.4 6.2 -54.4 8.4 42.4 45.2 102.9
 PHE-87   GLN-88  8.8 9.4 -113.3 -10.3 63.1 109.1 -27.5
 GLN-88   SER-89  10.4 10.7 42.6 105.1 75.6 71.7 353.0
 SER-89   TYR-90  10.5 14.4 -141.3 -11.5 151.0 161.0 -548.9
 TYR-90   ALA-91  11.1 13.9 140.6 -31.3 63.2 46.6 320.2
 ALA-91   LEU-92  13.2 11.1 -99.6 -25.8 98.0 102.2 -72.1
 LEU-92   TYR-93  13.7 13.0 23.1 -20.6 58.1 75.9 -42.5
 TYR-93   PRO-94  16.0 16.2 -14.1 19.0 64.2 43.8 -34.9
 PRO-94   HIS-95  19.4 18.2 179.1 -169.1 46.2 73.0 45.2
 HIS-95   MET-96  21.5 20.7 -10.8 27.7 120.3 131.2 49.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-153   ILE-154  2.8 2.6 1.5 -28.2 102.1 107.0 33.5
 ILE-154   VAL-155  1.9 1.8 35.4 -1.9 152.0 134.6 -106.4
 VAL-155   ARG-156  4.0 4.4 -8.6 -15.5 37.6 27.6 82.2
 ARG-156   LYS-157  1.0 2.1 -88.0 91.5 85.1 101.3 69.9
 LYS-157   PRO-158  3.3 2.9 28.3 -11.7 95.0 111.6 -7.6
 PRO-158   GLN-159  4.8 4.5 14.6 -8.9 82.3 84.1 -7.0
 GLN-159   VAL-160  8.6 8.2 5.0 9.1 13.6 20.6 55.4
 VAL-160   PHE-161  8.8 8.8 -5.1 -0.5 118.9 124.4 -27.0
 PHE-161   LEU-162  6.9 6.9 0.2 0.1 52.6 53.7 -10.5
 LEU-162   MET-163  9.3 9.2 5.3 7.0 41.3 38.9 47.7
 MET-163   ASP-164  8.9 8.6 -2.8 -8.3 135.5 129.0 -43.4
 ASP-164   GLU-165  11.3 11.0 10.1 3.8 27.9 26.1 35.9
 GLU-165   PRO-166  9.7 10.0 -9.6 2.6 92.6 90.6 -12.7
 PRO-166   LEU-167  7.0 6.8 0.7 -15.7 35.1 33.6 -48.9
 LEU-167   SER-168  5.1 5.2 6.0 -3.3 37.3 37.4 11.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees