Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-108   LEU-109  8.0 8.2 -9.4 4.4 124.7 127.4 -29.5
 LEU-109   GLY-110  6.2 6.4 -5.2 15.4 159.8 159.4 129.4
 GLY-110   ILE-111  6.4 6.5 13.6 -9.8 55.3 55.0 9.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-194   THR-195  1.8 2.1 9.3 -2.2 29.9 28.4 101.6
 THR-195   MET-196  2.4 2.9 -8.3 11.1 87.4 86.4 15.9
 MET-196   ASN-197  5.4 5.8 -6.2 10.5 57.4 59.8 -35.6
 ASN-197   GLU-198  4.4 4.6 -7.5 15.1 57.2 52.4 -72.6
 ASN-197   GLU-198  4.4 4.6 -7.5 15.1 57.2 52.4 -72.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-197   GLU-198  4.4 4.6 -7.5 15.1 57.2 52.4 -72.6
 ASN-197   GLU-198  4.4 4.6 -7.5 15.1 57.2 52.4 -72.6
 GLU-198   TYR-199  4.1 4.0 -17.6 9.0 39.3 47.7 89.5
 TYR-199   ILE-200  5.8 6.1 -1.9 2.8 108.3 111.9 34.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-214   LEU-215  5.1 5.4 2.6 -7.3 140.1 140.0 47.7
 LEU-215   ASP-216  6.4 6.8 -8.9 8.9 106.5 107.3 -20.6
 ASP-216   SER-217  9.3 9.6 1.4 -5.8 9.6 8.2 -39.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-252   LYS-253  4.4 4.3 -11.7 7.9 60.6 61.5 0.1
 LYS-253   TRP-254  4.3 4.4 0.3 7.1 59.4 59.6 39.1
 TRP-254   TRP-255  4.9 4.8 -10.4 10.3 159.9 158.7 14.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees