Hyb3 Light Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-105   VAL-106  4.5 4.6 -16.2 16.5 152.7 150.8 3.5
 VAL-106   LEU-106A  2.1 2.6 0.3 17.9 95.0 89.8 -2.1
 LEU-106A   GLY-107  2.1 1.6 -70.6 156.9 136.1 118.0 77.3
 GLY-107   GLN-108  4.1 3.2 19.0 -94.0 98.4 116.4 64.1
 GLN-108   PRO-109  5.2 5.9 -25.4 -3.5 83.7 96.6 2.4
 PRO-109   LYS-110  9.0 8.6 29.6 0.2 149.6 145.6 -44.9
 LYS-110   ALA-111  10.4 9.9 0.3 10.5 125.5 127.2 -17.5

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees