Elongation Factor Tu

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-83   HIS-84  24.8 26.6 176.9 0.9 6.0 88.2 -144.9
 HIS-84   ALA-85  25.1 24.5 -176.3 -7.5 113.2 106.2 54.1
 ALA-85   ASP-86  22.6 22.1 11.4 -17.5 76.3 136.1 5.4
 ASP-86   TYR-87  21.5 21.7 -8.6 34.4 43.8 54.3 -19.3
 TYR-87   VAL-88  20.2 20.6 -41.9 -25.6 58.1 117.8 -1.3
 VAL-88   LYS-89  18.2 18.2 -10.9 -4.5 74.2 84.3 0.8
 LYS-89   ASN-90  15.1 16.6 -7.0 9.8 32.7 21.5 -2.3
 ASN-90   MET-91  17.0 16.6 -4.1 7.4 32.8 75.6 1.5
 MET-91   ILE-92  17.6 14.8 -6.8 -20.7 80.1 118.4 -5.7
 ILE-92   THR-93  14.4 12.2 2.4 -16.4 134.4 109.6 10.3
 THR-93   GLY-94  12.6 11.5 23.8 135.7 156.4 169.0 201.8
 GLY-94   ALA-95  15.2 11.6 58.6 13.5 117.6 117.8 -43.5
 ALA-95   ALA-96  15.1 14.2 -1.7 -57.7 76.9 35.3 5.3
 ALA-96   GLN-97  11.4 15.9 154.0 10.1 157.4 107.6 -113.0
 GLN-97   MET-98  11.0 13.7 112.1 -34.8 132.6 116.4 -45.8
 MET-98   ASP-99  14.0 15.6 -34.9 8.9 55.8 59.8 16.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-204   ALA-205  5.1 3.8 6.0 0.5 94.2 49.5 6.5
 ALA-205   ILE-206  1.6 1.4 38.1 -122.2 139.4 112.2 58.8
 ILE-206   ASP-207  1.6 1.6 33.7 -19.7 98.8 103.5 2.7
 ASP-207   LYS-208  3.6 3.5 -33.8 52.9 142.2 143.1 16.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees