Phage Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-34   LEU-35  6.5 6.7 -4.7 -6.8 105.6 105.6 -36.7
 LEU-35   VAL-36  5.1 5.1 -3.3 3.0 91.6 94.5 -7.6
 VAL-36   GLU-37  1.4 1.3 12.3 3.6 34.9 35.7 64.8
 GLU-37   ASN-38  2.5 2.5 11.4 8.5 38.3 38.6 50.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-77   PHE-78  4.8 3.5 -34.1 -3.7 72.6 68.1 70.7
 PHE-78   LYS-79  3.1 2.5 -2.6 2.4 21.2 16.9 -3.7
 LYS-79   SER-80  3.0 2.5 -1.9 -6.2 86.2 84.2 17.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees