Probable Dimethyladenosine Transferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-245   ALA-246  12.1 11.8 -6.9 -5.8 151.6 158.7 -147.7
 ALA-246   VAL-247  14.4 13.9 8.4 -13.2 38.9 41.7 -48.3
 VAL-247   GLN-248  14.1 14.0 8.4 -0.4 75.0 77.2 122.8
 GLN-248   GLN-249  10.4 10.4 0.7 1.9 61.1 57.2 16.5
 GLN-249   LEU-250  9.8 9.7 2.6 12.4 12.4 16.8 271.0
 LEU-250   LEU-251  11.7 11.8 -4.9 -10.0 121.7 121.4 -231.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-267   GLU-268  7.0 7.2 7.4 -11.0 47.1 44.5 -89.7
 GLU-268   ASP-269  6.7 6.6 5.1 4.9 38.1 40.0 128.2
 ASP-269   PHE-270  6.2 6.3 -1.2 -3.8 77.7 75.6 -18.9
 PHE-270   SER-271  4.7 4.7 -5.3 8.3 134.1 133.0 44.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees