Cpn60(groel)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-187   PHE-188  4.4 4.4 -0.4 -0.6 46.4 46.3 -0.6
 PHE-188   VAL-189  2.1 2.1 1.3 3.4 70.1 70.1 25.3
 VAL-189   GLU-190  1.7 1.7 -22.6 14.3 44.6 43.0 46.8
 GLU-190   GLY-191  5.0 5.1 9.4 1.7 80.8 81.1 16.0
 GLY-191   TYR-192  7.4 7.3 -3.5 1.5 31.2 31.1 15.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-370   LEU-371  7.0 6.9 -0.8 1.2 55.8 56.8 -6.2
 LEU-371   ALA-372  7.6 7.6 0.4 2.5 87.2 86.4 -5.8
 ALA-372   GLY-373  5.2 5.2 -2.5 1.0 76.8 73.3 -11.4
 GLY-373   GLY-374  1.7 1.7 -14.2 4.9 17.9 18.7 102.9
 GLY-374   VAL-375  3.0 2.9 -1.2 -0.1 78.4 77.1 11.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees