Modification Methylase Taqi

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-257   MET-258  9.7 9.8 -10.1 -17.8 46.5 42.5 264.0
 MET-258   PRO-259  7.2 7.3 10.1 -3.2 64.4 67.8 16.4
 PRO-259   LEU-260  6.1 5.9 -5.4 3.2 85.7 84.9 -94.6
 LEU-260   GLY-261  2.7 2.5 2.8 -4.1 141.1 140.5 13.5
 GLY-261   ASP-262  4.5 4.5 10.3 -9.6 152.7 155.1 -38.9
 ASP-262   LEU-263  3.1 2.9 -7.0 1.8 86.4 85.6 85.9
 LEU-263   PHE-264  0.6 0.8 5.4 -1.2 90.3 87.0 -7.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-329   HIS-330  15.5 15.5 -4.3 6.1 101.4 99.0 -16.7
 HIS-330   LEU-331  11.9 11.8 3.8 -4.9 146.1 148.5 2.0
 LEU-331   VAL-332  8.9 8.9 -1.8 -0.3 77.7 76.9 59.2
 VAL-332   VAL-333  9.8 9.8 -5.3 4.5 127.7 129.2 27.8
 VAL-332   VAL-333  9.8 9.8 -5.3 4.5 127.7 129.2 27.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-332   VAL-333  9.8 9.8 -5.3 4.5 127.7 129.2 27.8
 VAL-332   VAL-333  9.8 9.8 -5.3 4.5 127.7 129.2 27.8
 VAL-333   ALA-334  8.2 7.9 -1.3 -5.0 111.6 107.7 -16.7
 ALA-334   HIS-335  10.4 10.2 -3.5 -10.5 74.0 78.9 60.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-354   GLU-355  17.8 17.8 11.8 2.5 77.5 88.0 23.5
 GLU-355   PHE-356  14.0 14.0 4.1 -3.0 20.0 23.1 42.8
 PHE-356   HIS-357  11.5 11.4 -5.6 5.4 105.9 106.2 -4.6
 HIS-357   LEU-358  11.1 11.0 1.0 2.3 43.3 44.4 59.3
 LEU-358   LEU-359  8.0 7.9 1.2 -6.2 57.8 56.6 -63.5
 LEU-359   PRO-360  8.5 8.4 -3.2 2.6 116.0 117.5 -33.6
 LEU-359   PRO-360  8.5 8.4 -3.2 2.6 116.0 117.5 -33.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-359   PRO-360  8.5 8.4 -3.2 2.6 116.0 117.5 -33.6
 LEU-359   PRO-360  8.5 8.4 -3.2 2.6 116.0 117.5 -33.6
 PRO-360   LYS-361  6.2 6.0 5.1 1.6 11.3 12.3 85.3
 LYS-361   GLU-362  4.6 4.5 7.0 -2.9 58.0 55.1 55.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-367   PRO-368  10.6 10.9 6.1 -7.0 46.9 49.0 -4.8
 PRO-368   SER-369  9.7 9.8 5.7 -6.0 15.2 12.8 -19.2
 SER-369   SER-370  10.8 10.9 10.3 -10.3 75.0 73.1 37.7
 SER-370   LEU-371  9.3 9.5 2.8 4.3 79.6 77.3 -45.7
 SER-370   LEU-371  9.3 9.5 2.8 4.3 79.6 77.3 -45.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-370   LEU-371  9.3 9.5 2.8 4.3 79.6 77.3 -45.7
 SER-370   LEU-371  9.3 9.5 2.8 4.3 79.6 77.3 -45.7
 LEU-371   VAL-372  5.9 6.2 -11.5 7.7 44.6 40.5 73.8
 VAL-372   GLN-373  5.7 5.9 -3.3 6.5 35.0 34.5 -62.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-404   VAL-405  6.6 6.6 -0.2 20.7 101.0 103.6 56.3
 VAL-405   ARG-406  5.5 5.3 5.3 25.8 117.2 99.3 -255.0
 ARG-406   ARG-407  8.9 8.8 -30.9 -10.1 68.9 41.8 414.8
 ARG-407   GLU-408  10.5 10.1 21.9 -33.6 54.2 80.4 -128.5
 GLU-408   TYR-409  11.4 11.7 33.4 -6.2 86.1 74.0 119.1
 TYR-409   GLY-410  8.1 8.9 9.9 -15.7 150.2 144.5 86.6
 GLY-410   PHE-411  6.8 7.5 7.5 -22.2 135.0 134.6 197.8
 PHE-411   HIS-412  8.2 7.8 24.0 -25.7 150.4 151.4 41.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees