Serine/threonine-Protein Kinase Mark1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-130   TYR-131  6.5 6.4 17.5 -23.4 119.3 113.4 -77.2
 TYR-131   ALA-132  5.3 5.2 -14.7 17.0 89.0 91.4 54.6
 ALA-132   SER-133  3.1 3.1 8.4 -6.4 142.3 142.1 -8.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-192   ASP-193  6.4 6.2 -7.8 -1.0 46.9 44.4 -20.7
 ASP-193   PHE-194  9.0 8.7 6.5 -6.9 135.8 135.2 15.9
 PHE-194   GLY-195  8.1 7.6 1.2 1.8 145.9 143.2 39.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-197   ASN-198  16.5 16.3 16.2 -67.9 151.8 171.6 658.3
 ASN-198   GLU-199  18.7 17.6 59.4 0.7 124.5 108.5 -479.8
 GLU-199   PHE-200  20.4 20.2 10.7 -5.2 144.4 146.1 -100.5
 PHE-200   THR-201  18.1 18.2 -8.6 4.0 60.9 54.2 -21.9
 THR-201   VAL-202  16.3 16.5 25.8 -52.5 167.9 156.0 133.5
 SER-212   PRO-213  23.6 23.7 7.0 16.5 130.1 119.1 -161.2
 PRO-213   PRO-214  21.3 21.5 -4.7 13.8 109.3 103.3 183.9
 PRO-214   TYR-215  22.1 22.3 -17.2 -6.7 119.1 118.8 45.5
 TYR-215   ALA-216  18.9 18.7 53.7 -66.7 22.7 36.6 -43.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-316   THR-317  8.2 8.4 -17.8 17.3 63.2 63.0 57.8
 THR-317   GLU-318  9.9 10.3 -13.3 19.3 137.6 144.5 35.7
 GLU-318   PRO-319  10.7 11.0 -7.0 16.3 99.1 94.5 -30.5
 PRO-319   ASP-320  14.0 14.5 8.5 -13.1 92.5 97.6 -52.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees