Tryptophan Synthase Beta Chain 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-9   TYR-10  11.8 12.1 -7.3 4.5 90.2 91.3 8.1
 TYR-10   VAL-11  15.5 16.0 1.9 3.2 39.0 38.5 50.8
 VAL-11   PRO-12  16.0 16.5 5.5 -0.1 110.4 105.3 -62.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-14   LEU-15  17.7 18.1 2.7 5.8 106.7 105.6 -54.8
 LEU-15   VAL-16  14.2 14.6 6.7 -8.7 45.1 45.8 2.0
 VAL-16   GLY-17  12.7 13.2 3.9 -1.6 99.1 99.4 25.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-23   LYS-24  3.4 3.4 2.8 -0.5 105.6 108.3 7.5
 LYS-24   ALA-25  6.1 5.8 -3.2 5.0 134.0 134.4 49.2
 ALA-25   TYR-26  6.5 6.1 0.3 1.2 87.3 88.2 -27.2
 TYR-26   LYS-27  3.7 3.3 -3.0 3.2 42.9 44.6 -5.5
 LYS-27   ARG-28  5.1 4.8 -7.1 12.7 99.1 101.5 41.1
 ARG-28   PHE-29  8.5 8.2 -2.4 -10.8 138.0 132.6 -121.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-86   ILE-87  5.0 5.2 0.4 -5.1 85.8 87.1 31.2
 ILE-87   GLY-88  5.4 5.4 -1.1 5.6 29.2 29.9 -0.1
 GLY-88   GLN-89  5.3 5.2 -1.2 1.2 78.0 79.1 -8.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-182   ILE-183  5.5 5.8 -6.8 1.8 96.5 95.9 48.7
 ILE-183   GLY-184  8.2 8.5 -3.2 -0.4 75.7 81.5 -4.9
 GLY-184   SER-185  9.7 9.9 9.1 -6.4 57.9 55.1 49.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees