T-Lymphoma Invasion And Metastasis Inducing Protein 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-1239   GLU-1240  4.4 4.4 -1.6 0.3 33.0 33.4 25.0
 GLU-1240   PHE-1241  1.9 1.9 1.5 -1.8 98.6 98.7 -9.6
 PHE-1241   GLY-1242  1.9 2.0 -3.0 7.5 113.0 113.5 68.7
 GLY-1242   ALA-1243  4.4 4.4 -2.6 1.8 52.2 51.5 -5.0
 ALA-1243   VAL-1244  6.5 6.5 -2.1 -0.9 86.4 87.5 21.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-1301   LEU-1302  11.7 11.6 -3.1 3.4 129.6 129.9 -12.1
 LEU-1302   VAL-1303  11.9 11.8 -3.4 -1.7 137.8 136.1 -50.7
 VAL-1303   TYR-1304  9.1 8.9 -5.1 24.3 133.4 129.5 298.0
 TYR-1304   LYS-1305  9.0 9.0 20.0 69.2 63.5 74.8 611.2
 LYS-1305   ASP-1306  5.9 6.8 138.2 -178.3 45.5 33.4 -708.7
 ASP-1306   GLY-1307  6.0 6.1 -27.7 -52.1 103.8 100.0 -290.2
 GLY-1307   SER-1308  5.4 4.1 -148.7 55.1 108.4 96.5 -161.6
 SER-1308   LYS-1309  7.9 7.6 37.4 94.6 88.0 15.4 1871.0
 LYS-1309   GLN-1310  8.0 8.0 152.7 19.8 54.1 58.2 -1878.2
 GLN-1310   LYS-1311  7.2 4.9 161.1 -150.9 31.9 106.8 -55.7
 LYS-1311   LYS-1312  9.9 6.4 63.8 -127.4 82.6 109.3 385.4
 LYS-1312   LYS-1313  12.8 6.8 137.0 31.1 107.4 44.5 976.9
 LYS-1313   LEU-1314  11.9 7.2 -9.4 -31.3 145.2 121.8 -555.2
 LEU-1314   VAL-1315  11.6 5.7 -6.8 -40.8 97.7 153.2 -564.0
 VAL-1315   GLY-1316  14.9 6.2 46.4 -102.6 65.2 50.0 -626.0
 GLY-1316   SER-1317  14.4 2.9 42.7 -10.1 27.0 42.6 489.0
 SER-1317   HIS-1318  11.9 1.4 -28.0 151.9 103.7 128.6 1297.9
 HIS-1318   ARG-1319  12.4 1.0 -99.9 -20.4 124.5 65.0 68.9
 ARG-1319   LEU-1320  9.1 4.3 53.4 -8.8 126.8 152.2 -633.7
 LEU-1320   SER-1321  6.2 4.3 -43.0 -23.5 34.3 44.4 973.8
 SER-1321   ILE-1322  6.9 2.8 -6.3 26.8 66.8 61.2 -211.0
 ILE-1322   TYR-1323  4.8 5.4 -81.7 -64.1 8.1 30.9 -3630.5
 TYR-1323   GLU-1324  5.1 5.0 -68.7 49.4 64.9 81.5 29.3
 GLU-1324   GLU-1325  4.0 8.8 -89.7 16.6 28.2 16.1 1150.1
 GLU-1325   TRP-1326  4.8 8.8 51.5 -44.5 111.5 113.2 -51.6
 TRP-1326   ASP-1327  5.8 7.7 63.2 -125.0 161.9 155.4 992.2
 ASP-1327   PRO-1328  4.4 5.8 26.4 2.4 94.1 95.2 -1.2
 PRO-1328   PHE-1329  2.2 2.4 0.5 5.1 119.9 123.2 15.1
 PHE-1329   ARG-1330  5.2 5.0 55.0 -38.7 59.3 59.1 202.9
 ARG-1330   PHE-1331  8.0 8.3 -91.3 89.3 62.2 50.1 -48.7
 PHE-1331   ARG-1332  10.6 11.2 18.4 -19.8 171.6 155.2 14.4
 ARG-1332   HIS-1333  11.1 11.4 -20.2 12.7 72.5 62.2 29.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees