Transaldolase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-58   GLN-59  10.0 10.2 4.9 -11.8 122.9 125.4 71.0
 GLN-59   GLU-60  8.0 8.0 20.4 -4.4 78.0 86.6 70.7
 GLU-60   LEU-61  8.9 8.9 -13.6 6.2 140.5 133.5 -50.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-83   ILE-84  4.3 4.3 0.8 -6.4 128.9 126.0 26.6
 ILE-84   ASP-85  3.4 3.3 -0.4 1.3 32.3 26.5 -8.8
 ASP-85   LYS-86  3.5 3.6 -1.2 -1.9 98.5 93.7 -13.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-314   PHE-315  18.3 18.0 0.3 2.5 97.9 97.1 3.9
 PHE-315   ALA-316  14.5 14.3 -9.4 9.0 49.4 53.6 11.0
 ALA-316   ALA-317  15.1 14.8 -3.3 3.0 19.6 14.7 5.7
 ALA-317   ASP-318  16.3 16.0 -5.2 2.6 72.8 68.9 -4.4
 ASP-318   ALA-319  13.5 13.2 5.3 -5.6 107.5 102.0 -2.9
 ALA-319   ILE-320  11.0 10.9 8.2 -6.3 155.8 148.0 -12.3
 ILE-320   LYS-321  13.0 13.1 -3.8 0.3 42.7 36.7 18.9
 LYS-321   LEU-322  12.6 12.5 0.2 0.5 101.3 100.4 20.0
 LEU-322   GLU-323  8.9 8.8 -0.2 0.5 57.5 65.2 21.5
 GLU-323   ARG-324  9.0 8.9 -15.8 14.6 14.4 10.1 15.6
 ARG-324   MET-325  10.7 10.7 -16.8 6.8 59.6 54.6 55.6
 MET-325   LEU-326  8.1 8.4 8.3 -1.0 101.7 95.7 -6.6
 LEU-326   THR-327  5.3 5.3 -2.7 -10.1 46.9 53.7 87.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees