Prfa

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-130   PHE-131  2.6 2.2 -0.6 6.3 63.1 61.9 5.4
 PHE-131   ASN-132  5.0 4.7 2.4 -8.3 93.1 91.2 33.5
 ASN-132   ASP-133  5.4 5.2 5.2 -4.8 31.6 32.5 -23.0
 ASP-133   PHE-134  6.1 6.0 -1.0 8.4 107.8 113.7 56.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-148   ILE-149  2.0 1.8 15.0 -13.7 76.0 72.7 -27.5
 ILE-149   LEU-150  1.5 1.8 -9.7 26.5 32.2 31.1 -59.7
 LEU-150   THR-151  3.2 3.4 -7.8 -5.2 47.5 53.1 49.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-159   ASP-160  7.3 7.3 13.4 -4.8 107.7 98.7 6.2
 ASP-160   GLY-161  5.2 4.8 1.6 -17.3 169.7 170.2 102.8
 GLY-161   ILE-162  5.4 5.6 -3.2 10.9 63.4 64.3 -79.9
 ILE-162   LYS-163  3.9 4.1 1.1 -6.3 89.2 83.2 25.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-185   VAL-186  19.8 20.4 64.0 -30.6 87.4 116.4 -363.6
 VAL-186   SER-187  16.1 21.5 140.9 129.1 34.3 89.4 1319.9
 SER-187   ARG-188  16.6 21.1 108.4 -13.8 90.5 72.7 -717.9
 ARG-188   ILE-189  18.2 18.1 128.5 -15.2 109.2 85.8 -233.2
 ILE-189   ILE-190  15.1 16.6 34.9 12.0 42.1 64.4 249.2
 ILE-190   SER-191  12.9 13.4 7.9 -8.1 44.3 30.9 28.5
 SER-191   LYS-192  15.6 15.5 0.6 -14.4 105.1 98.3 16.2
 LYS-192   LEU-193  16.2 16.2 35.0 -4.0 78.6 101.3 5.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-203   SER-204  6.3 5.9 39.8 -0.6 37.8 33.3 272.4
 SER-204   CYS-205  8.7 8.4 -33.3 -1.5 142.4 151.5 -307.5
 CYS-205   PHE-206  5.7 5.5 9.6 -10.7 72.2 73.3 115.8
 PHE-206   TYR-207  4.5 3.9 -4.0 11.8 85.5 86.2 -0.8
 TYR-207   VAL-208  2.4 2.4 -4.7 8.6 122.1 133.2 -59.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-222   GLU-223  6.5 6.5 -2.1 5.6 124.9 119.6 34.1
 GLU-223   TRP-224  8.4 8.8 -21.2 22.2 101.4 99.3 -52.4
 TRP-224   PHE-225  6.6 7.1 2.5 -14.0 136.5 143.2 80.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees