Nuclear Factor Nf-Kappa-B P105 Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  SER-540   LYS-541  2.1 2.2 -13.7 8.8 141.2 142.9 -16.2  LYS-541   ALA-542  3.4 3.4 7.5 3.8 54.5 59.0 38.9  ALA-542   PRO-543  2.4 2.2 -3.3 6.7 139.3 147.2 25.3 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees