Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-713   LYS-714  8.3 8.0 -8.9 -2.3 45.7 49.9 41.0
 LYS-714   GLY-715  7.5 7.2 -7.3 -7.8 70.3 71.8 21.0
 GLY-715   PRO-716  3.8 3.4 16.3 -8.1 96.5 109.6 -18.9
 PRO-716   GLU-717  2.6 2.7 -93.6 72.9 37.5 36.3 115.3
 GLU-717   ILE-718  5.6 5.4 4.5 -6.6 96.7 96.4 -40.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-816   LEU-817  9.4 8.9 -16.2 16.9 52.7 45.3 53.0
 LEU-817   PRO-818  6.5 6.4 0.7 -4.1 126.8 120.8 28.7
 PRO-818   ALA-819  4.9 4.5 -12.7 -1.8 110.4 106.6 -18.6
 ALA-819   VAL-820  3.7 2.9 -2.6 0.6 78.5 59.0 2.8
 VAL-820   SER-821  0.7 0.9 -35.1 1.5 77.4 64.6 99.8
 SER-821   GLU-822  3.2 2.8 8.0 -3.4 160.5 150.8 -38.9
 GLU-822   LYS-823  5.0 4.8 -4.6 6.6 91.1 99.9 13.3
 LYS-823   ASP-824  7.0 6.9 -4.5 -6.3 89.8 91.5 -0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees