Phosphoenolpyruvate-Protein Phosphotransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-27   ARG-28  6.4 6.1 19.7 -24.1 86.6 79.3 -35.6
 ARG-28   LYS-29  8.2 7.7 24.4 -9.5 71.3 67.9 79.0
 LYS-29   LYS-30  10.9 10.9 -4.9 -2.1 42.8 41.2 43.3
 LYS-30   ILE-31  14.2 13.8 12.7 -19.8 102.5 110.9 -4.9
 ILE-31   SER-32  15.3 15.8 9.2 -18.3 83.1 89.8 -69.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-138   ARG-139  0.8 0.7 -23.0 17.3 79.6 79.8 63.4
 ARG-139   ASN-140  3.5 3.4 3.3 -1.6 59.5 55.5 11.9
 ASN-140   ILE-141  4.7 4.5 -8.3 0.4 65.6 66.3 64.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees