Udp-N-Acetylglucosamine 2-Epimerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-174   ASP-175  6.6 6.6 -10.7 17.2 28.1 22.7 -138.5
 ASP-175   ALA-176  7.1 7.3 4.3 -8.3 124.7 123.3 153.1
 ALA-176   LEU-177  6.5 6.6 5.5 -4.7 77.8 78.9 21.5
 LEU-177   LEU-178  3.9 3.8 -1.0 1.2 74.2 66.0 -87.3
 LEU-178   TRP-179  2.1 2.1 2.8 -5.1 172.3 174.9 60.1
 TRP-179   VAL-180  2.7 2.6 14.0 -13.6 108.0 107.1 -97.6
 VAL-180   ARG-181  2.6 2.7 14.5 -15.7 73.7 74.1 -46.6
 ARG-181   ASP-182  2.7 2.6 0.1 -28.1 123.1 122.3 255.4
 ASP-182   GLN-183  3.2 3.2 -17.3 -2.1 19.5 6.9 398.2
 GLN-183   VAL-184  2.8 1.8 -20.2 -13.6 90.5 61.4 269.1
 SER-186   SER-187  7.7 6.8 16.4 18.0 139.5 139.0 -578.6
 SER-187   ASP-188  8.7 8.6 -6.5 22.0 109.5 109.0 -19.8
 ASP-188   LYS-189  12.4 12.3 2.7 -2.5 102.4 107.5 -41.1
 LYS-189   LEU-190  12.8 13.3 0.8 1.3 59.0 64.2 176.5
 LEU-190   ARG-191  10.6 11.2 -3.8 17.0 162.8 167.5 217.6
 ARG-191   SER-192  11.6 11.6 -33.1 24.7 92.2 99.6 -169.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-294   GLU-295  7.2 7.0 2.1 -1.5 63.3 61.8 -79.8
 GLU-295   GLU-296  7.5 7.4 9.8 2.3 35.9 34.0 199.2
 GLU-296   ALA-297  5.3 5.2 -11.7 3.7 80.1 76.8 -42.9
 ALA-297   PRO-298  3.4 3.3 2.6 -5.1 109.7 111.4 -31.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-301   LYS-302  4.0 4.0 -14.8 15.5 124.7 125.1 13.8
 LYS-302   PRO-303  4.1 4.2 -3.7 -5.5 146.6 147.8 -165.5
 PRO-303   VAL-304  3.6 3.5 6.2 -2.8 89.6 85.7 213.2
 VAL-304   LEU-305  5.0 4.9 6.6 -0.3 162.1 161.8 -82.1
 VAL-304   LEU-305  5.0 4.9 6.6 -0.3 162.1 161.8 -82.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-304   LEU-305  5.0 4.9 6.6 -0.3 162.1 161.8 -82.1
 VAL-304   LEU-305  5.0 4.9 6.6 -0.3 162.1 161.8 -82.1
 LEU-305   VAL-306  7.0 6.9 6.5 -6.1 84.5 86.2 32.7
 ARG-308   ASP-309  13.3 13.0 13.8 -20.2 143.3 145.3 121.1
 ASP-309   THR-310  12.8 12.3 20.6 -32.7 77.5 79.1 -24.0
 THR-310   THR-311  13.0 12.9 -57.4 41.3 176.1 163.8 -386.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-312   ARG-313  14.6 14.7 35.4 -8.8 64.4 51.2 257.6
 ARG-313   PRO-314  11.6 11.6 -14.2 4.3 44.2 52.7 221.3
 PRO-314   GLU-315  11.2 11.3 -3.5 4.0 108.5 112.8 12.0
 GLU-315   ALA-316  10.6 10.7 -16.1 15.6 99.6 93.2 -80.3
 ALA-316   VAL-317  7.0 7.1 -6.3 2.7 31.4 30.8 28.2
 VAL-317   THR-318  6.1 6.3 -5.0 1.0 71.4 72.7 -74.0
 THR-318   ALA-319  8.0 8.4 4.6 -1.1 61.5 55.6 32.4
 ALA-319   GLY-320  7.2 7.4 -3.0 -6.8 79.9 77.3 51.6
 GLY-320   THR-321  3.7 3.9 10.3 -8.6 41.6 42.0 0.4
 THR-321   VAL-322  2.0 2.1 15.9 -13.6 103.1 102.2 -98.6
 VAL-322   ARG-323  3.4 3.0 -16.1 19.9 6.9 5.8 -11.5
 ARG-323   LEU-324  4.0 3.4 0.1 -2.5 102.3 106.0 -49.3
 LEU-324   VAL-325  7.4 6.6 -12.2 16.2 56.5 50.1 -244.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-336   THR-337  11.6 11.7 -4.9 -0.1 74.3 75.0 -18.4
 THR-337   ARG-338  13.7 13.9 3.2 -6.6 99.5 100.3 -59.8
 ARG-338   LEU-339  10.9 11.3 4.8 -2.1 31.0 32.7 127.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees