Ure2 Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-264   GLU-265  6.4 6.1 -7.3 8.0 55.9 57.6 0.1
 GLU-265   ARG-266  5.5 4.6 -8.5 12.2 86.8 95.6 2.1
 ARG-266   ARG-267  1.9 1.8 -12.7 18.4 148.0 150.1 25.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-268   ALA-269  4.7 3.4 -0.8 9.2 126.4 126.7 18.7
 ALA-269   LEU-270  4.2 3.0 -0.4 -1.5 61.3 60.0 4.4
 LEU-270   VAL-271  3.9 4.0 -8.8 5.1 44.5 53.8 13.0
 VAL-271   MET-272  5.3 5.0 -10.8 19.4 104.3 116.3 12.6
 MET-272   GLU-273  8.4 7.5 1.6 -15.6 63.7 67.8 -23.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-294   PHE-295  4.6 5.6 -22.8 4.7 97.4 97.6 -17.3
 PHE-295   ASP-296  0.8 1.8 8.4 -5.7 85.4 88.2 -13.2
 ASP-296   TYR-297  4.1 4.5 -8.9 7.9 128.3 124.9 -5.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees