Maltose/maltodextrin Transport Atp-Binding Protein Malk

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-30   PHE-31  7.6 7.4 9.8 1.3 77.3 87.1 29.4
 PHE-31   VAL-32  4.4 4.4 1.6 -1.2 142.5 142.4 18.0
 VAL-32   VAL-33  3.2 3.2 -9.6 19.8 95.7 91.4 -7.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-35   GLY-36  7.3 7.8 0.6 10.2 28.2 29.8 68.8
 GLY-36   PRO-37  10.1 10.7 -4.9 -10.4 82.8 75.5 -10.0
 PRO-37   SER-38  13.9 14.5 -14.2 10.7 92.6 92.1 -17.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-158   GLU-159  12.6 13.4 -84.0 105.8 120.0 123.3 51.3
 GLU-159   PRO-160  13.2 13.1 -74.9 16.8 134.5 152.1 -368.7
 PRO-160   LEU-161  15.0 13.6 -170.2 -10.2 75.5 124.3 519.9
 LEU-161   SER-162  18.6 13.4 -17.7 51.8 128.7 64.7 -220.3
 SER-162   ASN-163  18.1 16.1 65.8 59.8 116.5 57.8 324.7
 ASN-163   LEU-164  18.1 18.8 43.8 157.1 64.3 15.1 -855.6
 LEU-164   ASP-165  15.3 18.1 178.1 59.1 29.2 79.4 1253.5
 ASP-165   ALA-166  17.0 19.1 160.4 8.0 53.4 105.3 203.7
 ALA-166   ALA-167  18.0 17.6 -155.3 -31.8 127.9 131.9 -951.2
 ALA-167   LEU-168  16.1 16.0 12.3 -7.6 102.1 85.8 -26.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-169   VAL-170  13.5 12.9 -20.3 14.0 71.2 79.7 -29.8
 VAL-170   GLN-171  11.5 11.4 9.3 -28.6 118.3 130.5 54.4
 GLN-171   MET-172  10.6 9.5 24.0 -22.7 47.3 68.0 -30.0
 MET-172   ARG-173  10.2 9.1 11.5 5.7 73.5 52.1 94.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-187   ILE-188  8.1 8.3 -16.5 17.8 39.3 42.3 -5.0
 ILE-188   TYR-189  7.2 7.5 -9.5 20.2 107.1 108.6 42.2
 TYR-189   VAL-190  7.0 7.2 -3.5 -3.4 43.1 43.1 39.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-205   VAL-206  1.6 2.1 13.3 -24.0 79.1 81.7 -77.5
 VAL-206   LEU-207  5.2 5.6 4.7 0.7 37.1 32.6 47.1
 LEU-207   ASP-208  6.8 7.4 -22.6 46.6 112.7 109.3 105.1
 ASP-208   ALA-209  9.4 10.0 -14.7 -3.7 144.0 126.7 -99.3
 ALA-209   GLY-210  11.4 12.6 -38.1 70.0 101.1 110.9 55.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-212   ALA-213  3.2 3.7 -23.8 15.5 74.3 79.4 57.7
 ALA-213   GLN-214  5.2 5.5 -0.5 2.4 104.3 109.2 21.5
 GLN-214   VAL-215  4.3 4.4 1.1 -3.9 37.0 39.1 8.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees