Cbl

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-259   SER-260  4.2 4.4 10.0 4.8 67.0 63.2 18.8
 SER-260   LEU-261  0.6 0.8 -26.4 14.7 58.5 65.7 -5.1
 LEU-261   ALA-262  2.3 2.4 19.4 -8.9 91.5 93.9 -40.1
 ALA-262   VAL-263  5.2 5.4 -19.4 17.5 132.5 136.4 21.5
 VAL-263   THR-264  6.5 6.7 9.7 -1.5 35.3 25.3 18.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-268   MET-269  9.1 9.2 0.6 -8.3 84.4 83.5 -20.8
 MET-269   ALA-270  12.3 12.4 100.5 -118.0 49.9 38.5 -96.6
 ALA-270   PHE-271  11.5 12.6 -71.6 119.6 138.7 121.0 185.4
 PHE-271   LEU-272  13.6 14.9 -66.9 16.5 73.6 78.2 39.3
 LEU-272   THR-273  16.3 16.3 -22.5 -9.2 148.1 143.9 -90.8
 THR-273   TYR-274  18.2 17.8 3.5 8.0 108.4 108.4 -21.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-292   PHE-293  13.3 13.4 -19.1 8.5 150.1 158.4 -56.4
 PHE-293   ARG-294  10.9 11.3 26.7 -24.8 69.1 67.5 -90.2
 ARG-294   LEU-295  11.1 10.6 21.6 18.5 32.4 24.2 195.2
 LEU-295   SER-296  10.0 9.4 -28.1 60.9 126.4 125.1 111.6
 SER-296   CYS-297  12.0 11.2 25.7 -23.8 45.5 50.8 14.6
 CYS-297   THR-298  13.3 13.1 -12.7 -1.8 161.4 164.7 -125.4
 THR-298   ARG-299  13.2 13.0 0.2 9.0 77.5 78.0 38.9
 ARG-299   LEU-300  9.8 9.8 1.9 -3.7 59.0 61.5 -23.0
 ARG-299   LEU-300  9.8 9.8 1.9 -3.7 59.0 61.5 -23.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-299   LEU-300  9.8 9.8 1.9 -3.7 59.0 61.5 -23.0
 ARG-299   LEU-300  9.8 9.8 1.9 -3.7 59.0 61.5 -23.0
 LEU-300   GLY-301  7.6 7.8 -18.0 27.8 95.9 96.0 67.5
 GLY-301   GLN-302  4.2 4.5 -30.0 21.5 102.0 122.9 -51.3
 GLN-302   TRP-303  6.2 6.5 23.6 2.3 34.7 40.5 155.7
 TRP-303   ALA-304  7.8 8.3 -2.0 15.4 84.7 87.0 34.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees