Thermosome

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-30   LEU-31  6.9 7.0 2.8 10.3 55.2 58.6 44.5
 LEU-31   GLU-32  3.7 3.9 14.8 30.2 25.4 18.9 213.1
 GLU-32   ILE-33  5.3 5.5 16.5 7.9 71.9 59.8 44.4
 ILE-33   LYS-34  8.0 7.3 9.9 -21.2 75.5 89.3 -22.7
 LYS-34   LYS-35  11.1 11.1 -21.8 0.8 165.8 158.1 -97.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-56   GLU-57  10.7 10.7 8.6 -7.8 29.4 35.9 9.8
 GLU-57   THR-58  8.7 8.5 14.3 -2.7 69.2 71.4 41.8
 THR-58   ASN-59  5.6 5.8 3.5 -6.2 67.9 53.2 -11.6
 ASN-59   THR-60  8.7 8.9 1.0 3.6 29.5 32.4 5.1
 THR-60   PHE-61  10.2 9.9 4.6 -9.3 44.8 45.7 -12.7
 PHE-61   LYS-62  6.8 6.5 2.1 4.6 74.2 64.7 35.1
 LYS-62   GLN-63  6.7 6.5 -3.1 0.7 125.8 132.3 -20.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-81   ILE-82  7.3 7.6 7.6 -7.3 70.8 73.9 -8.6
 ILE-82   ASP-83  4.2 4.3 6.1 18.3 25.0 17.4 125.9
 ASP-83   ASP-84  4.4 4.0 -29.4 7.1 102.7 97.9 -33.7
 ASP-84   VAL-85  5.2 5.5 -3.0 -10.3 80.2 75.0 4.2
 ASP-84   VAL-85  5.2 5.5 -3.0 -10.3 80.2 75.0 4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-84   VAL-85  5.2 5.5 -3.0 -10.3 80.2 75.0 4.2
 ASP-84   VAL-85  5.2 5.5 -3.0 -10.3 80.2 75.0 4.2
 VAL-85   ALA-86  2.8 3.6 7.8 9.1 28.2 36.6 79.8
 ALA-86   GLN-87  2.3 2.2 -8.1 4.9 115.6 125.9 -27.1
 GLN-87   HIS-88  5.6 5.1 11.5 -8.5 105.7 109.3 12.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees