Coat Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-244   THR-245  5.4 5.2 -17.7 -6.9 37.2 38.4 108.4
 THR-245   ALA-246  2.5 2.1 0.8 2.7 96.4 95.3 -15.3
 ALA-246   LYS-247  3.8 3.4 6.4 -1.4 88.2 86.4 -3.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-250   ALA-251  11.6 11.7 -3.9 15.3 65.0 67.5 -12.0
 ALA-251   SER-252  14.9 15.0 15.7 -0.5 77.1 66.1 22.6
 SER-252   ASN-253  18.3 18.3 -88.1 -59.5 38.2 62.3 510.2
 ASN-253   ASP-254  18.6 18.3 -11.4 -123.7 99.6 77.6 -108.8
 ASP-254   LYS-255  22.4 15.4 68.2 -141.3 44.8 88.2 -171.4
 LYS-255   VAL-256  22.5 16.0 0.5 -65.0 92.1 33.4 -297.3
 VAL-256   SER-257  19.1 16.8 -79.9 136.7 57.3 116.8 31.1
 SER-257   ASP-258  15.8 13.6 -141.4 36.2 46.9 63.2 344.9
 ASP-258   GLY-259  13.2 11.3 36.8 0.3 77.5 87.9 69.7
 GLY-259   PRO-260  9.7 9.3 -54.4 -8.7 167.9 164.0 -337.3
 PRO-260   THR-261  7.9 7.6 5.7 -17.4 55.1 59.9 -41.1
 THR-261   TYR-262  10.2 10.1 3.1 -3.8 60.3 58.9 -8.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees