Carbon Monoxide Dehydrogenase Alpha Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-311   LYS-312  19.9 19.5 0.9 -1.2 129.5 130.0 1.1
 LYS-312   LEU-313  19.3 18.8 0.1 -0.9 107.8 106.5 -1.1
 LEU-313   THR-314  16.6 15.9 0.0 -1.0 144.7 146.2 99.8
 THR-314   LYS-315  16.7 16.1 18.8 -25.9 116.6 121.7 51.9
 LYS-315   ILE-316  13.0 12.6 -3.5 -23.4 8.7 13.4 432.6
 ILE-316   LYS-317  12.7 13.0 -10.3 19.6 55.8 55.7 -131.1
 LYS-317   LEU-318  11.9 11.1 -29.3 20.4 38.0 28.5 128.2
 LEU-318   ASP-319  9.6 9.7 -33.6 38.6 28.8 48.5 -107.1
 ASP-319   LEU-320  10.1 10.6 -15.6 48.9 65.9 57.6 -326.2
 LEU-320   PRO-321  7.3 7.2 3.8 0.1 121.4 121.2 -31.9
 PRO-321   ILE-322  7.7 7.6 -0.2 -0.7 122.3 121.9 2.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-494   LEU-495  25.7 25.8 0.4 -0.4 118.1 118.4 -1.9
 LEU-495   THR-496  22.2 22.2 -0.6 -0.4 47.1 47.5 35.6
 THR-496   ASP-497  21.5 21.6 0.4 -5.2 135.5 136.3 10.6
 ASP-497   GLU-498  19.7 19.7 -23.5 16.6 61.7 58.0 189.2
 GLU-498   THR-499  23.0 23.0 -13.5 13.2 114.7 121.9 -163.6
 THR-499   VAL-500  24.3 24.5 -24.0 16.1 101.1 98.3 -52.2
 VAL-500   ASP-501  21.7 21.5 -6.4 0.8 28.8 26.2 68.3
 ASP-501   THR-502  21.4 21.3 0.2 -0.3 91.1 92.0 2.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees