Cystathionine Gamma-Lyase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-11   LEU-12  9.0 9.2 -14.1 -3.2 76.5 75.2 237.8
 LEU-12   PRO-13  6.5 6.5 -3.8 -16.3 141.9 141.9 -451.6
 PRO-13   HIS-14  8.5 8.5 -0.5 6.6 129.5 127.0 271.6
 HIS-14   PHE-15  7.0 6.9 10.9 -6.3 100.2 99.9 59.6
 PHE-15   GLN-16  6.8 6.9 -9.8 11.6 127.0 126.8 149.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-25   GLY-26  15.0 14.9 4.2 1.4 120.9 118.5 -58.3
 GLY-26   GLN-27  17.1 17.1 -3.2 1.4 13.6 14.4 16.5
 GLN-27   ASP-28  16.8 16.8 -9.2 -1.5 74.0 72.1 116.8
 ASP-28   PRO-29  20.1 20.0 4.7 11.4 146.7 142.4 -184.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-35   ALA-36  23.7 23.6 -17.5 -14.3 71.5 84.1 25.7
 ALA-36   VAL-37  20.2 20.0 10.0 -0.1 38.8 38.9 229.7
 VAL-37   VAL-38  17.6 17.1 -13.9 14.1 113.8 110.0 -0.8
 VAL-38   PRO-39  15.5 15.1 -1.9 -2.0 89.7 90.5 96.4
 VAL-38   PRO-39  15.5 15.1 -1.9 -2.0 89.7 90.5 96.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-38   PRO-39  15.5 15.1 -1.9 -2.0 89.7 90.5 96.4
 VAL-38   PRO-39  15.5 15.1 -1.9 -2.0 89.7 90.5 96.4
 PRO-39   PRO-40  17.9 17.8 -1.0 -1.1 135.3 133.0 -18.8
 PRO-40   ILE-41  19.5 19.4 -0.4 -1.3 63.8 63.4 130.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-108   CYS-109  22.2 22.1 6.9 -9.9 143.8 148.4 92.3
 CYS-109   MET-110  21.4 21.2 -15.1 9.7 100.4 97.2 156.1
 MET-110   ASP-111  19.8 19.3 -18.3 1.1 75.9 67.2 341.0
 ASP-111   ASP-112  22.3 22.3 21.7 -10.5 14.7 21.1 112.0
 ASP-111   ASP-112  22.3 22.3 21.7 -10.5 14.7 21.1 112.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-111   ASP-112  22.3 22.3 21.7 -10.5 14.7 21.1 112.0
 ASP-111   ASP-112  22.3 22.3 21.7 -10.5 14.7 21.1 112.0
 ASP-112   VAL-113  21.5 21.1 75.0 -79.4 45.8 54.8 407.6
 VAL-113   TYR-114  20.5 20.1 -2.8 12.3 159.4 158.2 164.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-156   GLU-157  15.0 15.4 13.3 3.6 155.9 150.7 -404.5
 GLU-157   THR-158  14.0 14.1 9.5 -5.1 82.8 76.0 123.9
 THR-158   PRO-159  11.8 11.6 -13.3 -9.0 45.4 44.8 196.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-166   ILE-167  12.6 12.8 -4.1 6.9 29.7 24.6 -68.0
 ILE-167   ASP-168  11.6 11.6 17.8 -10.6 109.0 104.0 191.8
 ASP-168   ILE-169  8.6 8.4 0.7 0.0 90.6 92.1 23.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-184   VAL-185  15.0 15.2 -0.5 1.2 11.6 16.0 -38.3
 VAL-185   VAL-186  15.0 15.1 3.5 -5.6 99.7 100.4 -21.0
 VAL-186   ASP-187  12.3 12.3 -1.7 -6.1 3.5 2.5 168.6
 ASP-187   ASN-188  13.1 13.1 10.6 -17.1 109.7 106.1 -140.4
 ASN-188   THR-189  9.6 9.7 4.4 2.7 163.7 166.0 -32.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-204   ILE-205  13.9 14.1 -2.2 -0.9 9.2 9.3 167.8
 ILE-205   SER-206  14.2 14.2 -1.9 2.5 65.6 66.3 250.1
 SER-206   MET-207  11.6 11.7 9.8 -10.7 150.8 153.9 -150.0
 MET-207   TYR-208  13.6 13.6 4.7 -6.7 135.3 130.8 -59.5
 TYR-208   SER-209  12.9 12.7 -1.8 10.8 52.2 48.8 -97.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-258   LEU-259  6.2 6.3 2.5 -13.1 36.0 38.6 -62.9
 LEU-259   LYS-260  6.1 6.1 5.2 2.8 102.0 100.9 -24.1
 LYS-260   THR-261  5.9 5.9 -7.7 4.3 88.2 91.5 179.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-265   MET-266  3.4 3.4 5.9 -5.7 147.7 148.0 -54.4
 MET-266   GLU-267  4.2 4.2 -1.1 6.5 78.5 77.9 118.6
 GLU-267   LYS-268  6.8 6.6 -3.7 -2.5 120.4 119.0 -5.7
 LYS-268   HIS-269  8.4 8.5 -1.3 1.8 71.0 73.6 -92.6
 HIS-269   PHE-270  9.0 9.1 7.2 0.4 140.1 144.0 -96.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-300   GLU-301  13.8 13.8 -12.4 6.7 62.2 64.0 76.8
 GLU-301   LEU-302  11.9 12.3 -5.6 6.5 89.1 88.3 -6.0
 LEU-302   VAL-303  9.1 9.4 -0.6 -4.9 152.0 152.7 -13.4
 VAL-303   LYS-304  8.8 8.9 3.4 5.9 99.0 100.1 -18.5
 VAL-303   LYS-304  8.8 8.9 3.4 5.9 99.0 100.1 -18.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-303   LYS-304  8.8 8.9 3.4 5.9 99.0 100.1 -18.5
 VAL-303   LYS-304  8.8 8.9 3.4 5.9 99.0 100.1 -18.5
 LYS-304   ARG-305  8.6 8.7 6.6 -5.7 57.1 56.3 34.2
 ARG-305   GLN-306  6.0 6.0 -13.8 22.7 66.8 67.1 55.6
 GLN-306   CYS-307  3.7 3.7 3.4 -6.3 12.0 17.6 113.7
 GLN-306   CYS-307  3.7 3.7 3.4 -6.3 12.0 17.6 113.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-306   CYS-307  3.7 3.7 3.4 -6.3 12.0 17.6 113.7
 GLN-306   CYS-307  3.7 3.7 3.4 -6.3 12.0 17.6 113.7
 CYS-307   THR-308  4.2 4.1 -4.8 3.0 109.7 111.3 -34.9
 THR-308   GLY-309  5.1 5.0 4.6 4.5 52.0 50.7 233.5
 GLY-309   CYS-310  7.2 7.2 -2.2 6.4 80.0 84.4 275.5
 GLY-309   CYS-310  7.2 7.2 -2.2 6.4 80.0 84.4 275.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-309   CYS-310  7.2 7.2 -2.2 6.4 80.0 84.4 275.5
 GLY-309   CYS-310  7.2 7.2 -2.2 6.4 80.0 84.4 275.5
 CYS-310   THR-311  8.6 8.7 -14.4 16.7 13.8 17.5 11.1
 THR-311   GLY-312  9.1 8.9 7.2 -1.7 125.0 125.5 -57.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees