Eukaryotic Translation Initiation Factor 5

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-323   PHE-324  6.3 6.4 -4.0 3.5 125.5 122.9 -23.5
 PHE-324   MET-325  3.9 4.0 0.5 -1.9 121.2 124.8 34.3
 MET-325   GLY-326  1.0 1.1 0.3 0.9 135.5 134.7 -5.2
 GLY-326   GLY-327  3.4 3.8 -1.2 1.2 114.0 113.3 -8.1
 GLY-327   ILE-328  5.6 5.9 1.7 -2.4 80.9 84.5 37.5
 ILE-328   GLU-329  4.5 4.8 5.8 -1.8 150.2 153.7 -33.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-355   ILE-356  5.2 5.1 9.1 -5.7 22.9 25.3 33.4
 ILE-356   SER-357  6.2 6.0 7.5 -1.3 81.8 77.7 6.0
 SER-357   GLU-358  9.9 9.6 5.2 4.2 43.4 45.8 169.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-360   ILE-361  8.5 7.9 -4.4 -3.1 77.4 78.8 4.7
 ILE-361   MET-362  7.7 7.3 -0.3 -0.1 26.5 27.4 13.4
 MET-362   ARG-363  10.2 9.7 -0.2 2.3 41.0 42.3 3.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees