Pol Polyprotein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-21
ALA-22
2.9
3.0
1.9
-2.0
114.6
114.7
-7.3
ALA-22
ALA-23
3.9
4.0
0.4
-6.6
55.8
55.1
7.2
ALA-23
LYS-24
4.1
4.3
3.1
12.2
65.1
70.4
66.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-34
VAL-35
9.9
9.8
-4.9
10.3
76.8
83.4
34.0
VAL-35
ILE-36
6.5
6.3
-2.5
-3.6
5.4
11.5
16.0
ILE-36
PRO-37
5.7
5.5
-0.8
7.4
77.0
75.2
15.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-51
ILE-52
10.1
10.2
-8.5
12.0
136.9
138.9
19.9
ILE-52
ILE-53
7.9
7.9
-2.7
-15.2
80.4
75.6
91.8
ILE-53
GLY-54
10.4
10.5
38.4
-11.1
42.7
37.2
151.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-64
VAL-65
13.4
12.6
37.5
1.8
93.1
87.0
50.2
VAL-65
LEU-66
10.1
9.1
10.2
-25.9
38.0
6.3
-149.1
LEU-66
GLY-67
8.3
7.8
25.4
128.3
102.8
81.9
221.4
GLY-67
GLY-68
8.1
5.3
81.8
-98.7
73.3
121.8
89.5
GLY-68
VAL-69
5.2
6.3
-167.9
21.8
92.3
96.6
-102.6
VAL-69
ILE-70
6.5
6.8
-6.0
0.7
70.7
69.3
77.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-78
GLY-79
3.7
3.6
-4.2
16.8
95.5
98.5
46.2
GLY-79
VAL-80
1.6
1.7
-7.2
12.5
67.7
72.3
-12.5
VAL-80
ILE-81
3.1
3.0
-9.8
11.1
63.6
59.9
-1.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-96
LYS-97
6.9
6.9
5.2
3.9
46.7
46.4
50.2
LYS-97
ILE-98
7.3
7.5
1.7
-6.6
29.0
32.9
9.8
ILE-98
ALA-99
7.5
7.7
7.9
-5.3
47.9
39.3
-9.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees