Putative Enzyme Ydif
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-284
LEU-285
16.9
16.9
22.0
7.2
151.2
144.1
-743.9
LEU-285
ASN-286
16.3
16.3
-11.0
8.3
38.6
39.4
47.7
ASN-286
GLN-287
17.5
17.5
-1.3
9.4
41.4
37.2
-162.1
GLN-287
ARG-288
16.2
16.3
-17.1
12.2
90.6
87.0
-124.2
GLN-287
ARG-288
16.2
16.3
-17.1
12.2
90.6
87.0
-124.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-287
ARG-288
16.2
16.3
-17.1
12.2
90.6
87.0
-124.2
GLN-287
ARG-288
16.2
16.3
-17.1
12.2
90.6
87.0
-124.2
ARG-288
LYS-289
14.1
14.1
-3.6
0.0
50.9
57.0
-45.6
LYS-289
LEU-290
12.3
12.3
4.9
-8.1
64.5
62.2
-107.9
LEU-290
VAL-291
12.2
12.3
5.6
-7.5
52.1
52.5
9.7
VAL-291
ALA-292
10.0
10.1
4.7
-7.3
119.8
118.1
151.9
ALA-292
ARG-293
8.0
7.9
4.3
-0.1
113.4
113.6
-131.6
ARG-293
ARG-294
7.4
7.4
6.4
-4.8
46.8
45.0
41.2
ARG-294
ALA-295
7.0
7.0
-2.2
4.4
106.8
106.9
-105.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-300
LYS-301
6.6
6.8
-14.9
0.8
47.5
40.0
450.4
LYS-301
GLY-302
8.4
8.5
2.6
-3.0
65.6
66.5
-54.3
GLY-302
ALA-303
10.7
10.7
8.8
-2.0
28.8
30.5
179.5
ALA-303
VAL-304
9.3
9.2
-4.9
3.7
82.3
81.4
-60.2
VAL-304
GLY-305
10.4
10.6
-5.0
-1.0
130.5
132.2
-255.5
GLY-305
ASN-306
8.6
8.5
-10.7
-23.2
89.2
93.9
-96.8
ASN-306
VAL-307
10.4
9.9
-4.3
-53.5
66.3
101.0
-14.4
VAL-307
GLY-308
11.1
9.6
-0.9
0.5
144.8
109.4
-138.7
GLY-308
VAL-309
11.2
12.2
14.4
38.0
97.5
111.4
-390.9
VAL-309
GLY-310
14.5
14.8
22.9
20.9
65.6
60.8
686.3
GLY-310
ILE-311
14.8
14.3
-17.0
6.3
60.0
56.9
303.7
ILE-311
ALA-312
13.0
13.2
-11.1
-15.5
63.1
51.2
461.7
ALA-312
ASP-313
9.7
9.7
14.4
-11.2
153.1
134.4
-18.2
ASP-313
GLY-314
11.7
11.2
15.2
-13.6
147.1
169.4
-107.0
GLY-314
ILE-315
10.4
10.7
11.0
5.0
105.0
104.6
-274.1
ILE-315
GLY-316
6.6
6.9
14.0
-5.8
152.2
145.9
-167.5
GLY-316
LEU-317
7.2
7.3
3.0
-3.2
139.9
143.3
14.5
LEU-317
VAL-318
8.4
8.4
6.9
-2.0
94.1
91.2
-11.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-411
ILE-412
5.4
5.4
-0.5
-6.2
84.5
88.3
-15.0
ILE-412
ILE-413
4.2
4.0
1.4
1.7
80.9
82.3
-69.8
ILE-413
PHE-414
2.8
2.8
-1.8
2.0
84.4
81.7
68.0
PHE-414
CYS-415
5.9
5.9
-2.4
1.9
121.5
119.8
-13.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-445
GLU-446
11.6
11.6
-4.4
-4.2
101.1
95.6
-88.5
GLU-446
LEU-447
10.9
11.0
17.8
-21.4
118.0
119.7
77.2
LEU-447
PRO-448
12.2
12.4
12.9
-12.9
46.1
46.7
44.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-462
ASP-463
7.4
7.5
-11.8
10.0
100.9
95.8
-32.6
ASP-463
VAL-464
5.0
5.1
0.7
-2.4
83.2
83.7
63.1
VAL-464
ARG-465
1.3
1.4
-0.3
-2.6
106.1
102.9
119.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees