Calmodulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-31   LEU-32  7.0 7.1 -27.4 0.0 82.9 87.4 35.2
 LEU-32   GLY-33  4.8 4.9 -20.4 30.1 124.0 130.3 64.1
 GLY-33   THR-34  7.6 7.8 -24.9 12.1 166.7 160.2 -91.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-53   GLU-54  5.8 6.2 -18.6 22.7 107.6 112.5 17.5
 GLU-54   VAL-55  4.5 5.1 -33.0 3.4 88.0 100.6 0.5
 VAL-55   ASP-56  0.9 1.6 -102.5 103.3 121.9 96.9 -26.3
 ASP-56   ALA-57  3.2 2.4 -31.6 39.9 157.0 134.3 73.8
 ALA-57   ASP-58  2.9 3.0 -19.2 44.3 117.1 97.0 38.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-62   ILE-63  6.7 6.5 21.4 -23.5 95.1 94.0 8.0
 ILE-63   ASP-64  3.4 3.4 19.4 -8.4 58.5 55.0 19.7
 ASP-64   PHE-65  5.4 5.3 16.7 -1.1 60.3 50.8 75.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees