Ubiquitin-Like 2 Activating Enzyme E1b

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-437   ASN-438  1.7 1.6 -3.6 -7.1 88.1 86.7 2.5
 ASN-438   PRO-439  3.9 3.8 -2.5 1.8 126.3 135.8 0.9
 PRO-439   ASN-440  4.8 4.7 -15.1 39.7 141.5 132.5 113.0
 ASN-440   CYS-441  6.8 7.3 -24.7 7.4 124.7 132.4 -91.7
 CYS-441   TYR-442  5.2 5.6 -12.8 -2.1 161.9 160.1 -94.6
 TYR-442   VAL-443  5.5 6.1 4.5 6.0 68.7 62.3 53.2
 VAL-443   CYS-444  3.0 3.9 11.9 -19.8 116.2 110.7 44.4
 CYS-444   ALA-445  2.0 1.8 12.1 -14.9 106.1 106.1 -11.9
 ALA-445   SER-446  1.8 2.1 -7.7 15.2 121.6 127.8 32.4
 SER-446   LYS-447  5.0 4.8 8.4 -5.5 20.7 22.7 17.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-518   ALA-519  6.1 6.3 14.0 -15.9 106.1 109.0 8.8
 ALA-519   ASP-520  4.1 4.2 -1.4 3.8 109.0 111.7 14.1
 ASP-520   ASP-521  1.0 1.1 -13.6 17.9 79.1 78.2 -0.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-526   THR-527  2.8 2.9 -1.2 2.1 122.2 124.9 -2.5
 THR-527   LEU-528  1.1 0.8 -20.5 19.4 56.1 61.0 6.1
 LEU-528   LEU-529  4.1 4.2 23.0 -22.0 64.4 59.8 24.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees